DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TkR86C and prlhr2b

DIOPT Version :10

Sequence 1:NP_001097741.1 Gene:TkR86C / 41286 FlyBaseID:FBgn0004841 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_001108618.2 Gene:prlhr2b / 792590 ZFINID:ZDB-GENE-091117-9 Length:354 Species:Danio rerio


Alignment Length:293 Identity:98/293 - (33%)
Similarity:159/293 - (54%) Gaps:13/293 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 LMMFVAIAGNGIVLWIVTGHRSMRTVTNYFLLNLSIADLLMSSLNCV-FNFIFMLNS-DWPFGSI 154
            |::.|.:.||.::::::...|.|..|||:|:.||:.:|:|| .:.|| |...:..:: .|.||..
Zfish    53 LVVLVGVFGNYLLIYVICRTRKMHNVTNFFIGNLAFSDMLM-CVTCVPFTLAYAFSAHGWTFGRF 116

  Fly   155 YCTINNFVANVTVSTSVFTLVAISFDRYIAIVHPLKRRTSRRKVRIILVLIWALSCVLSAPCLLY 219
            .|.:...:..|||..|||||.||:.|||.|.|||||:|.|......:|..||.|||||.||.:.:
Zfish   117 MCYLVFLIQPVTVYVSVFTLTAIAVDRYYATVHPLKKRISMAACAYVLSGIWLLSCVLVAPAVAH 181

  Fly   220 SSIMTKHY-YNGKSRTVCFMMWPDGRYPTSMADYAYNLIILVLTYGIPMIVMLICYSLMGRVLWG 283
                |.|. :..:..|:|...|..  ..|....|||:  .|:|||.:|:..:.:.|..:...|..
Zfish   182 ----TYHVEFRDEGLTICEEFWLG--QETQRLVYAYS--TLLLTYILPLSAVCVSYLCISVKLRN 238

  Fly   284 SRSIGENTDRQMESMK-SKRKVVRMFIAIVSIFAICWLPYHLFFIYAYHNNQVASTKYVQHMYLG 347
            ..:.|..|..|.|:.: .|||:.|:...:|:.||:||||.|:|.:....:.::.:.::...:.|.
Zfish   239 CVAPGHRTRDQAEAQRIRKRKIFRLVSLVVAAFAVCWLPIHVFNVLRDIDIRLINKRHFLLIQLL 303

  Fly   348 FYWLAMSNAMVNPLIYYWMNKRFRMYFQRIICC 380
            .:..|||::..||.:|.|::.|||...:::..|
Zfish   304 CHLCAMSSSCCNPFLYAWLHDRFRAELRKMFTC 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TkR86CNP_001097741.1 7tmA_TACR 84..374 CDD:320512 97/285 (34%)
TM helix 1 85..111 CDD:320512 4/18 (22%)
TM helix 2 118..144 CDD:320512 11/26 (42%)
TM helix 3 156..186 CDD:320512 15/29 (52%)
TM helix 4 197..218 CDD:320512 10/20 (50%)
TM helix 5 251..280 CDD:320512 9/28 (32%)
TM helix 6 299..329 CDD:320512 13/30 (43%)
TM helix 7 342..367 CDD:320512 8/24 (33%)
prlhr2bNP_001108618.2 None

Return to query results.
Submit another query.