DRSC/TRiP Functional Genomics Resources

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Protein Alignment TkR86C and nmbr

DIOPT Version :10

Sequence 1:NP_001097741.1 Gene:TkR86C / 41286 FlyBaseID:FBgn0004841 Length:555 Species:Drosophila melanogaster
Sequence 2:XP_690325.2 Gene:nmbr / 561834 ZFINID:ZDB-GENE-041014-369 Length:372 Species:Danio rerio


Alignment Length:380 Identity:98/380 - (25%)
Similarity:184/380 - (48%) Gaps:62/380 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 EAKDFLTECLFPSPTRPYELPWEQKTIWAIIFGLMMFVAIAGNGIVLWIVTGHRSMRTVTNYFLL 123
            |...|:.:|:.||                 ::.|::.|.:.||..::.|.....:||:|.|.|:.
Zfish    25 ETVHFIIQCVIPS-----------------VYILIITVGLLGNITLVKIFITTSAMRSVPNIFIS 72

  Fly   124 NLSIADLLMSSLNCV----FNFIFMLNSDWPFGSIYCTINNFVANVTVSTSVFTLVAISFDRYIA 184
            :|::.|||: .:.||    |.:.:   .:|.||::.|.:...:...:|..|||||.|:|.||:.|
Zfish    73 SLAVGDLLL-LVTCVPVDAFRYFY---EEWIFGTVACKMIPVIQLTSVGVSVFTLTALSADRHKA 133

  Fly   185 IVHPLKRRTSRRKVRIIL--VLIWALSCVLSAPCLLYSSIMTKHYYNGKSRTVCFMMWPDGRYPT 247
            ||:|:..::|.......|  :.||.:|.:|:.|..::|.::.....| .:.|.|.      .||.
Zfish   134 IVNPMDIQSSSAVFWTCLKAITIWVVSVLLAIPEAVFSQVVHMPDKN-TTFTACV------PYPL 191

  Fly   248 S--MADYAYNLIILVLTYGIPMIVMLICYSLMGRVLWGSR-----SIGENTDRQMESMKSKRKVV 305
            |  |....::::|.::.:.||:.::.:.|..:.|.|..|.     .|.|::.||.|:.|...|:|
Zfish   192 SNEMHPKIHSIMIFLVYFLIPLSIISVYYYHIARTLIKSAHDMPGEISEHSKRQTETRKRLAKIV 256

  Fly   306 RMFIAIVSIFAICWLPYHLFFIY-AYHNNQVASTKYVQHMYLGFY--WLAMSNAMVNPLIYYWMN 367
            .:|   |.:||:||.|.|:.::| :::..|:.|:  :.|:.:...  .|:.|::.|||...|.::
Zfish   257 LVF---VGLFALCWFPNHVLYMYRSFNYRQIDSS--LSHLIITLVARVLSFSSSCVNPFALYLLS 316

  Fly   368 KRFRMYFQRIICCCCVGLTRHRFDSPKSRLTNKNSSNRHTRGGYTVAHSLPNSSP 422
            :.||.:|...:.|     .:.::....:......|:.|.|        |:..|:|
Zfish   317 ESFRRHFNNQLLC-----RQRKYQERNTSYLQSTSAIRMT--------SIRKSTP 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TkR86CNP_001097741.1 7tmA_TACR 84..374 CDD:320512 85/305 (28%)
TM helix 1 85..111 CDD:320512 5/25 (20%)
TM helix 2 118..144 CDD:320512 9/29 (31%)
TM helix 3 156..186 CDD:320512 12/29 (41%)
TM helix 4 197..218 CDD:320512 6/22 (27%)
TM helix 5 251..280 CDD:320512 4/28 (14%)
TM helix 6 299..329 CDD:320512 12/30 (40%)
TM helix 7 342..367 CDD:320512 7/26 (27%)
nmbrXP_690325.2 7tm_GPCRs 33..323 CDD:475119 88/322 (27%)
TM helix 1 35..59 CDD:410628 7/40 (18%)
TM helix 2 68..90 CDD:410628 8/22 (36%)
TM helix 3 106..128 CDD:410628 7/21 (33%)
TM helix 4 151..167 CDD:410628 5/15 (33%)
TM helix 5 198..221 CDD:410628 3/22 (14%)
TM helix 6 253..275 CDD:410628 10/24 (42%)
TM helix 7 291..316 CDD:410628 6/24 (25%)

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