DRSC/TRiP Functional Genomics Resources

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Protein Alignment TkR86C and hcrtr2

DIOPT Version :10

Sequence 1:NP_001097741.1 Gene:TkR86C / 41286 FlyBaseID:FBgn0004841 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_001073337.1 Gene:hcrtr2 / 561260 ZFINID:ZDB-GENE-070228-3 Length:424 Species:Danio rerio


Alignment Length:429 Identity:125/429 - (29%)
Similarity:208/429 - (48%) Gaps:68/429 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 LSSIIDNRDNLESINEAKDFL----TECLFPSPTRPYELPWEQKTIWAIIFG--LMMFVAIAGNG 102
            |:|..|...:..:.||..:.|    .|.|.|   :.||        |.:|.|  |:..|::.||.
Zfish    20 LNSSADTISHSHAENEDDELLKYIWREYLHP---KQYE--------WVLIAGYILVFLVSLVGNT 73

  Fly   103 IVLWIVTGHRSMRTVTNYFLLNLSIADLLMSSLNCV-FNFIFMLNSDWPFGSIYCTINNFVANVT 166
            :|.:.|..:..||||||||::|||.||:|: ::.|: .:.:..:...|.||...|.|..::..::
Zfish    74 LVCFAVWKNHHMRTVTNYFIVNLSFADILV-TITCLPASLVVDITETWFFGQTLCKILPYLQTIS 137

  Fly   167 VSTSVFTLVAISFDRYIAIVHPLKRRTSRRKVRIILVLIWALSCVLSAP--CLLYSSIMTKHYYN 229
            ||.||.||..|:.||:.||.||||.:::.::.|..:||||.:||::..|  .::.||.:.....|
Zfish   138 VSVSVLTLSCIAQDRWYAICHPLKFKSTAKRARKSIVLIWLVSCIMMIPQAVVMESSSLMPELTN 202

  Fly   230 GKSR-TVCFMMWPDGRYPTSMADYAYNLIILVLTYGIPMIVMLICYSLMGRVLW-----GSRSI- 287
            ..|. |||...|||..||.     .|:....::||..|:.:|::.|..:...||     ||.|: 
Zfish   203 KTSLFTVCDEQWPDEIYPK-----VYHTCFFIVTYFAPLCLMVLAYIQICHKLWCQQIPGSSSVL 262

  Fly   288 ----------------GEN-------TDRQMESMKSKRKVVRMFIAIVSIFAICWLPYHLFFIY- 328
                            ||:       ...:.:.:|::||..||.:.::.:||:|:||..:..|. 
Zfish   263 QRQWKSLQCSAHAVGSGESVKVRTSTVSAEAKQVKARRKTARMLMVVLFVFALCYLPISILNIMK 327

  Fly   329 ----AYHNNQVASTKYVQHMYLGFYWLAMSNAMVNPLIYYWMNKRFRMYFQRIICCCCVGLTRHR 389
                |:.|.....|.|....:  .:||..:|:..||:||.:::.:||..|:....|.|.|    |
Zfish   328 RVFGAFKNTGNRETVYAWFTF--SHWLIYANSAANPIIYNFLSGKFREEFKAAFICQCSG----R 386

  Fly   390 FDSPKSRLTNKNSSNRHTRGGYTVAHSLPNSSPPTTQTL 428
            .::.|.|...:.|::.. :...|..::|.|.|..:.|.:
Zfish   387 GETHKQRARGRTSTDSR-KSLSTQVNNLDNISRISDQAV 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TkR86CNP_001097741.1 7tmA_TACR 84..374 CDD:320512 101/329 (31%)
TM helix 1 85..111 CDD:320512 9/27 (33%)
TM helix 2 118..144 CDD:320512 11/26 (42%)
TM helix 3 156..186 CDD:320512 12/29 (41%)
TM helix 4 197..218 CDD:320512 8/22 (36%)
TM helix 5 251..280 CDD:320512 6/28 (21%)
TM helix 6 299..329 CDD:320512 11/34 (32%)
TM helix 7 342..367 CDD:320512 7/24 (29%)
hcrtr2NP_001073337.1 7tmA_OXR 55..375 CDD:320336 101/327 (31%)
TM helix 1 56..82 CDD:320336 8/25 (32%)
TM helix 2 89..115 CDD:320336 11/26 (42%)
TM helix 3 127..157 CDD:320336 12/29 (41%)
TM helix 4 168..189 CDD:320336 8/20 (40%)
TM helix 5 220..249 CDD:320336 7/33 (21%)
TM helix 6 297..327 CDD:320336 11/29 (38%)
TM helix 7 343..368 CDD:320336 8/26 (31%)
Orexin_rec2 390..>424 CDD:427531 8/34 (24%)

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