DRSC/TRiP Functional Genomics Resources

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Protein Alignment TkR86C and tacr3a

DIOPT Version :10

Sequence 1:NP_001097741.1 Gene:TkR86C / 41286 FlyBaseID:FBgn0004841 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_001243567.1 Gene:tacr3a / 555482 ZFINID:ZDB-GENE-090312-106 Length:399 Species:Danio rerio


Alignment Length:390 Identity:139/390 - (35%)
Similarity:224/390 - (57%) Gaps:31/390 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 PWEQKTIWAIIFGLMMFVAIAGNGIVLWIVTGHRSMRTVTNYFLLNLSIADLLMSSLNCVFNFIF 143
            || :..:|::.:..::.:|:.||.||:||:..|:.||||||||||||:.:|..|::.|.:.||::
Zfish    22 PW-RVALWSVAYSSILAIAVFGNLIVMWIILAHKRMRTVTNYFLLNLAFSDASMAAFNTLINFVY 85

  Fly   144 MLNSDWPFGSIYCTINNFVANVTVSTSVFTLVAISFDRYIAIVHPLKRRTSRRKVRIILVLIWAL 208
            ..:.||.||..||..:||....:|..|::::.||:.|||:||:||||.|.|....::|:|.||.|
Zfish    86 ATHGDWYFGEAYCKFHNFFPVTSVFASIYSMSAIAVDRYMAIIHPLKPRLSATATKVIIVCIWVL 150

  Fly   209 SCVLSAPCLLYSSIMTKHYYNGKSRTVCFMMWPDGRYPTSMADYAYNLIILVLTYGIPMIVMLIC 273
            :.||:.|...:|:|...     ..||:|::.||    ..|...:.|::|:.:|.|.:|::||.|.
Zfish   151 AVVLAFPLCFFSTIKKL-----PKRTLCYVAWP----RPSEDPFMYHIIVAMLVYVLPLVVMGIN 206

  Fly   274 YSLMGRVLWGSRSIGENTDRQMESMKSKRKVVRMFIAIVSIFAICWLPYHLFFIYAYHNNQVAST 338
            |:::|..|||....|:::|.....:::|||||:|.|.:|..||.||||||::|:....|.|:|..
Zfish   207 YTIVGLTLWGGEIPGDSSDNYQGQLRAKRKVVKMMIIVVVTFAFCWLPYHVYFLVTGLNKQLARW 271

  Fly   339 KYVQHMYLGFYWLAMSNAMVNPLIYYWMNKRFRMYFQRIICCCCVGLTRHRFDSPKSRLTNKNSS 403
            |::|.:||...|||||:.|.||:||..:|.|||..|:|:...|           |..::::.:..
Zfish   272 KFIQQIYLSIMWLAMSSTMYNPIIYCCLNSRFRAGFKRVFRWC-----------PFVQVSDYDEL 325

  Fly   404 NRHTRGGYTVAHSLPNSSPPTTQTLLAVLAQTLTQP-KPQTQ----LLLSHHSPHPTQPSAAETK 463
            ...     .:.|.:...|...|.:.:.....|:..| :|.||    .||:||..|....:.|::|
Zfish   326 ELR-----AMRHKVARQSSMYTMSRMETTVVTVCDPSEPNTQPGRKSLLNHHHHHNGCSNPAKSK 385

  Fly   464  463
            Zfish   386  385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TkR86CNP_001097741.1 7tmA_TACR 84..374 CDD:320512 118/289 (41%)
TM helix 1 85..111 CDD:320512 8/25 (32%)
TM helix 2 118..144 CDD:320512 13/25 (52%)
TM helix 3 156..186 CDD:320512 11/29 (38%)
TM helix 4 197..218 CDD:320512 8/20 (40%)
TM helix 5 251..280 CDD:320512 10/28 (36%)
TM helix 6 299..329 CDD:320512 17/29 (59%)
TM helix 7 342..367 CDD:320512 13/24 (54%)
tacr3aNP_001243567.1 7tm_GPCRs 26..307 CDD:475119 118/289 (41%)
TM helix 1 28..52 CDD:320669 8/23 (35%)
TM helix 2 61..83 CDD:320669 10/21 (48%)
TM helix 3 99..121 CDD:320669 6/21 (29%)
TM helix 4 142..158 CDD:320669 7/15 (47%)
TM helix 5 185..208 CDD:320669 8/22 (36%)
TM helix 6 238..260 CDD:320669 12/21 (57%)
TM helix 7 275..300 CDD:320669 13/24 (54%)

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