DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TkR86C and AstA-R2

DIOPT Version :10

Sequence 1:NP_001097741.1 Gene:TkR86C / 41286 FlyBaseID:FBgn0004841 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster


Alignment Length:388 Identity:106/388 - (27%)
Similarity:178/388 - (45%) Gaps:58/388 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 NTTLLG--SLNRTEVVSLLSSIIDNRDNLESINEAKDFLT--ECLFPSPTRPYELPWEQKTIWAI 88
            |||:|.  |||.|.          |.:|:.|      |.|  |.|..:.|    |||    |...
  Fly     3 NTTMLANISLNATR----------NEENITS------FFTDEEWLAINGT----LPW----IVGF 43

  Fly    89 IFGLMMFVAIAGNGIVLWIVTGHRSMRTVTNYFLLNLSIADLLMSSLNCVFNFIFMLNSDWPFGS 153
            .||::......||.:|:.:|..:.:||:.||..::||:.|||:...|...|.....:...||:|.
  Fly    44 FFGVIAITGFFGNLLVILVVVFNNNMRSTTNLMIVNLAAADLMFVILCIPFTATDYMVYYWPYGR 108

  Fly   154 IYCTINNFVANVTVSTSVFTLVAISFDRYIAIVHPLKRRTSRRK--VRIILVLIWALSCVLSAPC 216
            .:|....::..||...|::|||.:|.||::|:|||::.|..|.:  ..|.:|.:|.:..|:|.|.
  Fly   109 FWCRSVQYLIVVTAFASIYTLVLMSIDRFLAVVHPIRSRMMRTENITLIAIVTLWIVVLVVSVPV 173

  Fly   217 LLYSSIMTKHYYNGKSRT---VCFMMWPDGRYPTSMADYAYNLIILVLTYGIPMIVMLICYSLMG 278
            .....::..  |:.|...   :|.....|...|.:     |.:...:.:|.:|::::...|..|.
  Fly   174 AFTHDVVVD--YDAKKNITYGMCTFTTNDFLGPRT-----YQVTFFISSYLLPLMIISGLYMRMI 231

  Fly   279 RVLWGSRSIGENTDRQMESMKSKRKVVRMFIAIVSIFAICWLPYHLFFIY----AYHNNQVASTK 339
            ..||..   |.......||.:.:::|.|:.:.:|..||..|||..|..:.    ....|.:  ||
  Fly   232 MRLWRQ---GTGVRMSKESQRGRKRVTRLVVVVVIAFASLWLPVQLILLLKSLDVIETNTL--TK 291

  Fly   340 YVQHMYLGFYWLAMSNAMVNPLIYYWMNKRFRMYFQRIICCCCVGLTRHR---FDSPKSRLTN 399
            .|  :.:....||.|::.:|||:|.::::.||..|.:.:.|.    :|::   .|.|..|.|:
  Fly   292 LV--IQVTAQTLAYSSSCINPLLYAFLSENFRKAFYKAVNCS----SRYQNYTSDLPPPRKTS 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TkR86CNP_001097741.1 7tmA_TACR 84..374 CDD:320512 80/298 (27%)
TM helix 1 85..111 CDD:320512 7/25 (28%)
TM helix 2 118..144 CDD:320512 9/25 (36%)
TM helix 3 156..186 CDD:320512 11/29 (38%)
TM helix 4 197..218 CDD:320512 6/22 (27%)
TM helix 5 251..280 CDD:320512 5/28 (18%)
TM helix 6 299..329 CDD:320512 9/33 (27%)
TM helix 7 342..367 CDD:320512 7/24 (29%)
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 81/302 (27%)
TM helix 1 40..66 CDD:320224 7/25 (28%)
TM helix 2 73..99 CDD:320224 9/25 (36%)
TM helix 3 111..141 CDD:320224 11/29 (38%)
TM helix 4 153..173 CDD:320224 5/19 (26%)
TM helix 5 204..233 CDD:320224 6/33 (18%)
TM helix 6 249..279 CDD:320224 9/29 (31%)
TM helix 7 292..317 CDD:320224 8/26 (31%)

Return to query results.
Submit another query.