DRSC/TRiP Functional Genomics Resources

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Protein Alignment TkR86C and Hcrtr2

DIOPT Version :10

Sequence 1:NP_001097741.1 Gene:TkR86C / 41286 FlyBaseID:FBgn0004841 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_945200.1 Gene:Hcrtr2 / 387285 MGIID:2680765 Length:460 Species:Mus musculus


Alignment Length:434 Identity:117/434 - (26%)
Similarity:206/434 - (47%) Gaps:65/434 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 NRDNLESINEAKDFLTECLFPSPT------------RPYELPWEQKTIWAIIFG--LMMFVAIAG 100
            :|.|..|.:|..:  |:..|.:||            |.|..|.|.:  |.:|.|  ::..||:.|
Mouse    11 SRRNWSSASELNE--TQEPFLNPTDYDDEEFLRYLWREYLHPKEYE--WVLIAGYIIVFVVALIG 71

  Fly   101 NGIVLWIVTGHRSMRTVTNYFLLNLSIADLLMSSLNCV-FNFIFMLNSDWPFGSIYCTINNFVAN 164
            |.:|...|..:..||||||||::|||:||:|: ::.|: ...:..:...|.||...|.:..::..
Mouse    72 NVLVCVAVWKNHHMRTVTNYFIVNLSLADVLV-TITCLPATLVVDITETWFFGQSLCKVIPYLQT 135

  Fly   165 VTVSTSVFTLVAISFDRYIAIVHPLKRRTSRRKVRIILVLIWALSCVLSAP--CLLYSSIMTKHY 227
            |:||.||.||..|:.||:.||.|||..:::.::.|..:|:||.:||::..|  .::..|.|....
Mouse   136 VSVSVSVLTLSCIALDRWYAICHPLMFKSTAKRARNSIVVIWIVSCIIMIPQAIVMECSSMLPGL 200

  Fly   228 YNGKSR-TVCFMMWPDGRYPTSMADYAYNLIILVLTYGIPMIVMLICYSLMGRVLW-----GSRS 286
            .|..:. |||...|....||.     .|::...::||..|:.:|::.|..:.|.||     |:.|
Mouse   201 ANKTTLFTVCDEHWGGEVYPK-----MYHICFFLVTYMAPLCLMILAYLQIFRKLWCRQIPGTSS 260

  Fly   287 IGENTDRQ------------------------MESMKSKRKVVRMFIAIVSIFAICWLPYHLFFI 327
            :.:...:|                        ::.::::||..||.:.::.:||||:||..:..:
Mouse   261 VVQRKWKQQQPVSQPRGSGQQSKARISAVAAEIKQIRARRKTARMLMVVLLVFAICYLPISILNV 325

  Fly   328 YAYHNNQVASTKYVQHMYLGF---YWLAMSNAMVNPLIYYWMNKRFRMYFQRIICCCCVGLTRHR 389
            ..........|:..:.:|..|   :||..:|:..||:||.:::.:||..|:... .||:|:...:
Mouse   326 LKRVFGMFTHTEDRETVYAWFTFSHWLVYANSAANPIIYNFLSGKFREEFKAAF-SCCLGVHHRQ 389

  Fly   390 FDSPKSRLTNKNSSNRHTRGGYTVAHSLPNSSPPTTQTLLAVLA 433
            .|    ||....:|....:...|...:..|.|..:...:|..::
Mouse   390 GD----RLARGRTSTESRKSLTTQISNFDNVSKLSEHVVLTSIS 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TkR86CNP_001097741.1 7tmA_TACR 84..374 CDD:320512 93/327 (28%)
TM helix 1 85..111 CDD:320512 9/27 (33%)
TM helix 2 118..144 CDD:320512 11/26 (42%)
TM helix 3 156..186 CDD:320512 12/29 (41%)
TM helix 4 197..218 CDD:320512 7/22 (32%)
TM helix 5 251..280 CDD:320512 6/28 (21%)
TM helix 6 299..329 CDD:320512 10/29 (34%)
TM helix 7 342..367 CDD:320512 9/27 (33%)
Hcrtr2NP_945200.1 Required for response to orexin-A. /evidence=ECO:0000250|UniProtKB:O43614 33..49 2/15 (13%)
7tmA_OXR 55..375 CDD:320336 93/325 (29%)
TM helix 1 56..82 CDD:320336 8/25 (32%)
TM helix 2 89..115 CDD:320336 11/26 (42%)
TM helix 3 127..157 CDD:320336 12/29 (41%)
TM helix 4 168..189 CDD:320336 7/20 (35%)
TM helix 5 220..249 CDD:320336 7/33 (21%)
TM helix 6 297..327 CDD:320336 10/29 (34%)
TM helix 7 343..368 CDD:320336 9/24 (38%)
Orexin_rec2 386..443 CDD:427531 8/48 (17%)

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