DRSC/TRiP Functional Genomics Resources

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Protein Alignment TkR86C and Lkr

DIOPT Version :10

Sequence 1:NP_001097741.1 Gene:TkR86C / 41286 FlyBaseID:FBgn0004841 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_647968.3 Gene:Lkr / 38622 FlyBaseID:FBgn0035610 Length:542 Species:Drosophila melanogaster


Alignment Length:562 Identity:142/562 - (25%)
Similarity:243/562 - (43%) Gaps:114/562 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 IIDNRDNLESINEAKDFLTECLFPSPTRPYELPWEQKTIWAIIFGLMMFVAIAGNGIVLWIVTGH 111
            :|:....||.:..|::   |..|   .|.|..|.|...:.:|.:|.:..||:.||.:|:|:|...
  Fly     5 LIEQESRLEFLPGAEE---EAEF---ERLYAAPAEIVALLSIFYGGISIVAVIGNTLVIWVVATT 63

  Fly   112 RSMRTVTNYFLLNLSIADLLMSSLNCV-FNFIFMLNSDWPFGSIYCTINNFVANVTVSTSVFTLV 175
            |.||||||.::.||:.||::: .|.|: |.|...|...|......|:...||..::|:.|||||.
  Fly    64 RQMRTVTNMYIANLAFADVII-GLFCIPFQFQAALLQSWNLPWFMCSFCPFVQALSVNVSVFTLT 127

  Fly   176 AISFDRYIAIVHPLKRRTSRRKVRIILVLIWALSCVLSAPCLLYSSI--MTKHY------YNGKS 232
            ||:.||:.||::||:.|.::...:.|:..||.|:.:.:.|..:...:  :|:.:      || .:
  Fly   128 AIAIDRHRAIINPLRARPTKFVSKFIIGGIWMLALLFAVPFAIAFRVEELTERFRENNETYN-VT 191

  Fly   233 RTVCFMMWPDGRYPTSMAD-----YAYNLIILVLTYGIPMIVMLICYSLMGRVLWGSRSIGENTD 292
            |..|.        ..:::|     :.|.|:.  :.|.:|..|:...|..|...|||:|:.|...|
  Fly   192 RPFCM--------NKNLSDDQLQSFRYTLVF--VQYLVPFCVISFVYIQMAVRLWGTRAPGNAQD 246

  Fly   293 -RQMESMKSKRKVVRMFIAIVSIFAICWLPYHLFFIYAYHNNQVASTKYVQHMYLGFYWLAMSNA 356
             |.:..:|:|:||::|.|.:|.||.:||||..|:.|......::....::..::....||||||:
  Fly   247 SRDITLLKNKKKVIKMLIIVVIIFGLCWLPLQLYNILYVTIPEINDYHFISIVWFCCDWLAMSNS 311

  Fly   357 MVNPLIYYWMNKRFRMYF-QRIICCCCVGLTRHRFDSPKSRLTNKNSSNRHTRGGYTVAHSLPNS 420
            ..||.||...|::|:..| :|...|.|      :|.:  |...::.:.:.|||.. ::..:..||
  Fly   312 CYNPFIYGIYNEKFKREFNKRFAACFC------KFKT--SMDAHERTFSMHTRAS-SIRSTYANS 367

  Fly   421 SPPTTQTLLAVLAQTLTQPKPQTQLLLSHHS---------------------------------P 452
            |......|.......:...||...:...|.|                                 |
  Fly   368 SMRIRSNLFGPARGGVNNGKPGLHMPRVHGSGANSGIYNGSSGQNNNVNGQHHQHQSVVTFAATP 432

  Fly   453 HPTQPSAAETKSQWKRSTM------------ETQIQQAPVTSSCREQRSAQQQQPPGSGT----- 500
            ..:.|........|:|:..            :..:.:.|.|:...|:.::      |:|.     
  Fly   433 GVSAPGVGVAMPPWRRNNFKPLHPNVIECEDDVALMELPSTTPPSEELAS------GAGVQLALL 491

  Fly   501 NRAAVECIMER------PADGSSSPLCLSINNSIGERQRVKI 536
            :|.:..||.|:      ..||:    |:     :.|..||.:
  Fly   492 SRESSSCICEQEFGSQTECDGT----CI-----LSEVSRVHL 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TkR86CNP_001097741.1 7tmA_TACR 84..374 CDD:320512 96/304 (32%)
TM helix 1 85..111 CDD:320512 9/25 (36%)
TM helix 2 118..144 CDD:320512 10/26 (38%)
TM helix 3 156..186 CDD:320512 14/29 (48%)
TM helix 4 197..218 CDD:320512 5/20 (25%)
TM helix 5 251..280 CDD:320512 8/33 (24%)
TM helix 6 299..329 CDD:320512 15/29 (52%)
TM helix 7 342..367 CDD:320512 10/24 (42%)
LkrNP_647968.3 7tmA_leucokinin-like 36..329 CDD:320515 96/304 (32%)
TM helix 1 37..63 CDD:320515 9/25 (36%)
TM helix 2 70..95 CDD:320515 10/25 (40%)
TM helix 3 108..138 CDD:320515 14/29 (48%)
TM helix 4 149..170 CDD:320515 5/20 (25%)
TM helix 5 205..234 CDD:320515 7/30 (23%)
TM helix 6 254..284 CDD:320515 15/29 (52%)
TM helix 7 297..322 CDD:320515 10/24 (42%)

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