DRSC/TRiP Functional Genomics Resources

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Protein Alignment TkR86C and Hcar2

DIOPT Version :9

Sequence 1:NP_001097741.1 Gene:TkR86C / 41286 FlyBaseID:FBgn0004841 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_852141.1 Gene:Hcar2 / 353250 RGDID:727952 Length:360 Species:Rattus norvegicus


Alignment Length:361 Identity:96/361 - (26%)
Similarity:160/361 - (44%) Gaps:54/361 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 IFGLMMFVAIAGNGIVLWIVTGHRSMRTVTNYFLLNLSIADLLMSSLNCVFNFI---FMLNSDWP 150
            :.||.....:.|||:.|||...|......:..||.||::||.|:  :.|: .|:   ::.|.||.
  Rat    30 VLGLEFVFGLLGNGLALWIFCFHLKSWKSSRIFLFNLAVADFLL--IICL-PFLTDNYVQNWDWR 91

  Fly   151 FGSIYCTINNFVANVTVSTSVFTLVAISFDRYIAIVHP--LKRRTSRRKVRIILVLIWALSCVLS 213
            ||||.|.:..|:..:....|:..|..::.|||..:|||  ...:.|.|...||...:|.::..|:
  Rat    92 FGSIPCRVMLFMLAMNRQGSIIFLTVVAVDRYFRVVHPHHFLNKISNRTAAIISCFLWGITIGLT 156

  Fly   214 APCLLYSSIMTKHYYNG-----KSRTVCF-MMWPDGRYPTSMADYAYNLIILVLTYGIPMIVMLI 272
            .. |||:.:||:   ||     .|.::|: ..|.|..:              :|.:.:|:.::|.
  Rat   157 VH-LLYTDMMTR---NGDANLCSSFSICYTFRWHDAMF--------------LLEFFLPLGIILF 203

  Fly   273 CYSLMGRVLWGSRSIGENTDRQMESMKSKRKVVRMFIAIVSIFAICWLP-----YHLFFIYAYHN 332
            |   .||::|..|      .|||:.....::.:...:.:..:|.||:||     ..:|::...||
  Rat   204 C---SGRIIWSLR------QRQMDRHVKIKRAINFIMVVAIVFVICFLPSVAVRIRIFWLLYKHN 259

  Fly   333 NQVASTKYVQHMYLGFYW---LAMSNAMVNPLIYYWMNKRFRMYFQRIICCCCVGLTRHRFDSPK 394
              |.:......:.|.|:.   ....|:|::|::||:.:..|..:|...|..|....|....|:.:
  Rat   260 --VRNCDIYSSVDLAFFTTLSFTYMNSMLDPVVYYFSSPSFPNFFSTCINRCLRRKTLGEPDNNR 322

  Fly   395 S---RLTNKNSSNRHTRGGYTVAHSLPNSSPPTTQT 427
            |   .||...|:.|...|......|.|.|.|....|
  Rat   323 STSVELTGDPSTIRSIPGALMTDPSEPGSPPYLAST 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TkR86CNP_001097741.1 7tm_4 92..376 CDD:304433 80/302 (26%)
7tm_1 100..363 CDD:278431 75/281 (27%)
Hcar2NP_852141.1 7tmA_HCAR1-3 25..302 CDD:320329 80/303 (26%)
TM helix 1 27..51 CDD:320329 8/20 (40%)
TM helix 2 60..81 CDD:320329 9/23 (39%)
TM helix 3 98..120 CDD:320329 3/21 (14%)
TM helix 4 143..159 CDD:320329 4/16 (25%)
TM helix 5 183..206 CDD:320329 6/39 (15%)
TM helix 6 227..249 CDD:320329 5/21 (24%)
TM helix 7 270..295 CDD:320329 7/24 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 320..360 11/39 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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