DRSC/TRiP Functional Genomics Resources

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Protein Alignment TkR86C and Oprl1

DIOPT Version :10

Sequence 1:NP_001097741.1 Gene:TkR86C / 41286 FlyBaseID:FBgn0004841 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_001305876.1 Gene:Oprl1 / 29256 RGDID:68438 Length:396 Species:Rattus norvegicus


Alignment Length:378 Identity:104/378 - (27%)
Similarity:174/378 - (46%) Gaps:69/378 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 ECLFPSP-------------------TRPYE----------LPWEQKTIWAIIFGLMMFVAIA-- 99
            |.|||:|                   |.|:.          ||...|   ..|.||.:.|.|.  
  Rat     2 ESLFPAPYWEVLYGSHFQGNLSLLNETVPHHLLLNASHSAFLPLGLK---VTIVGLYLAVCIGGL 63

  Fly   100 -GNGIVLWIVTGHRSMRTVTNYFLLNLSIADLLMSSLNCVFNFIFMLNSDWPFGSIYCTINNFVA 163
             ||.:|::::..|..|:|.||.::.||::||.|: .|...|....:|...||||:..|.....:.
  Rat    64 LGNCLVMYVILRHTKMKTATNIYIFNLALADTLV-LLTLPFQGTDILLGFWPFGNALCKTVIAID 127

  Fly   164 NVTVSTSVFTLVAISFDRYIAIVHPLKR---RTSRRKVRIILVLIWALSCVLSAPCLLYSSIMTK 225
            ...:.||.|||.|:|.|||:||.||::.   ||| .|.:.:.|.||||:.|:..|..:..|...:
  Rat   128 YYNMFTSTFTLTAMSVDRYVAICHPIRALDVRTS-SKAQAVNVAIWALASVVGVPVAIMGSAQVE 191

  Fly   226 HYYNGKSRTVCFMMWPDGRYPTSMADY---AYNLIILVLTYGIPMIVMLICYSLMGRVLWGSRSI 287
                 .....|.:..|      :..||   .:.:.|.:.::.||::::.:|||||.|.|.|.|.:
  Rat   192 -----DEEIECLVEIP------APQDYWGPVFAICIFLFSFIIPVLIISVCYSLMIRRLRGVRLL 245

  Fly   288 GENTDRQMESMKSKRKVVRMFIAIVSIFAICWLPYHLFFIYAYHNNQVASTKYVQHM----YLGF 348
            ..:.::.    ::.|::.|:.:.:|::|..||.|..:|.:......|..|...|..:    .||:
  Rat   246 SGSREKD----RNLRRITRLVLVVVAVFVGCWTPVQVFVLVQGLGVQPGSETAVAILRFCTALGY 306

  Fly   349 YWLAMSNAMVNPLIYYWMNKRFRMYFQRIICCCCVGLTRHRFDSPKSRLTNKN 401
            .     |:.:||::|.::::.|:..|::.  ||...|.|....|.:.|...|:
  Rat   307 V-----NSCLNPILYAFLDENFKACFRKF--CCASSLHREMQVSDRVRSIAKD 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TkR86CNP_001097741.1 7tmA_TACR 84..374 CDD:320512 86/302 (28%)
TM helix 1 85..111 CDD:320512 8/28 (29%)
TM helix 2 118..144 CDD:320512 9/25 (36%)
TM helix 3 156..186 CDD:320512 12/29 (41%)
TM helix 4 197..218 CDD:320512 8/20 (40%)
TM helix 5 251..280 CDD:320512 10/31 (32%)
TM helix 6 299..329 CDD:320512 8/29 (28%)
TM helix 7 342..367 CDD:320512 6/28 (21%)
Oprl1NP_001305876.1 7tmA_NOFQ_opioid_R 49..327 CDD:320220 86/299 (29%)
TM helix 1 50..76 CDD:320220 8/25 (32%)
TM helix 2 83..109 CDD:320220 9/26 (35%)
TM helix 3 120..150 CDD:320220 12/29 (41%)
TM helix 4 162..184 CDD:320220 8/21 (38%)
TM helix 5 209..238 CDD:320220 8/28 (29%)
TM helix 6 253..283 CDD:320220 8/29 (28%)
TM helix 7 295..320 CDD:320220 7/29 (24%)

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