DRSC/TRiP Functional Genomics Resources

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Protein Alignment TkR86C and Nmbr

DIOPT Version :10

Sequence 1:NP_001097741.1 Gene:TkR86C / 41286 FlyBaseID:FBgn0004841 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_036931.1 Gene:Nmbr / 25264 RGDID:3181 Length:390 Species:Rattus norvegicus


Alignment Length:420 Identity:110/420 - (26%)
Similarity:191/420 - (45%) Gaps:69/420 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 SIVNTTLLGSLNRTEVVSLLSSIIDNRDNLESINEAKDFLTECLFPSPTRPYELPWEQKTIWAII 89
            |:.|.:|....:.:|   |...:.:|....:|.....:.:..|:.||                 :
  Rat     5 SLPNLSLPTEASESE---LEPEVWENDFLPDSDGTTAELVIRCVIPS-----------------L 49

  Fly    90 FGLMMFVAIAGNGIVLWIVTGHRSMRTVTNYFLLNLSIADLLMSSLNCV----FNFIFMLNSDWP 150
            :.:::.|.:.||.:::.|...:.:||:|.|.|:.||:..|||: .|.||    ..:.|   .:|.
  Rat    50 YLIIISVGLLGNIMLVKIFLTNSTMRSVPNIFISNLAAGDLLL-LLTCVPVDASRYFF---DEWV 110

  Fly   151 FGSIYCTINNFVANVTVSTSVFTLVAISFDRYIAIVHPLKRRTSRRKVRIIL------VLIWALS 209
            ||.:.|.:...:...:|..|||||.|:|.|||.|||:|:..:||    .::|      |.||.:|
  Rat   111 FGKLGCKLIPAIQLTSVGVSVFTLTALSADRYRAIVNPMDMQTS----GVVLWTSLKAVGIWVVS 171

  Fly   210 CVLSAPCLLYSSIMTKHYYNGKSRTVCFMMWPDGRYPTS--MADYAYNLIILVLTYGIPMIVMLI 272
            .:|:.|..::|.:......:..|.|.|.      .||.:  :....::::|.::.:.||::::.|
  Rat   172 VLLAVPEAVFSEVARIGSSDNSSFTACI------PYPQTDELHPKIHSVLIFLVYFLIPLVIISI 230

  Fly   273 CYSLMGRVLWGSR-----SIGENTDRQMESMKSKRKVVRMFIAIVSIFAICWLPYHLFFIYAYHN 332
            .|..:.:.|..|.     ...|:|.:|||:.|...|:|.:|   |..|..||.|.|:.::|...|
  Rat   231 YYYHIAKTLIRSAHNLPGEYNEHTKKQMETRKRLAKIVLVF---VGCFVFCWFPNHILYLYRSFN 292

  Fly   333 NQVASTKYVQHMYLGFY--WLAMSNAMVNPLIYYWMNKRFRMYFQRIICCCCVG-------LTRH 388
            .:..... :.||.:...  .|:.||:.|||...|.:::.||.:|...:||   |       .|.:
  Rat   293 YKEIDPS-LGHMIVTLVARVLSFSNSCVNPFALYLLSESFRKHFNSQLCC---GQKSYPERSTSY 353

  Fly   389 RFDSPKSRLTN--KNSSNRHTRGGYTVAHS 416
            ...|...|:|:  .|:.|..|.......||
  Rat   354 LLSSSAVRMTSLKSNAKNVVTNSVLLNGHS 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TkR86CNP_001097741.1 7tmA_TACR 84..374 CDD:320512 87/308 (28%)
TM helix 1 85..111 CDD:320512 4/25 (16%)
TM helix 2 118..144 CDD:320512 10/29 (34%)
TM helix 3 156..186 CDD:320512 13/29 (45%)
TM helix 4 197..218 CDD:320512 7/26 (27%)
TM helix 5 251..280 CDD:320512 5/28 (18%)
TM helix 6 299..329 CDD:320512 10/29 (34%)
TM helix 7 342..367 CDD:320512 9/26 (35%)
NmbrNP_036931.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20 4/17 (24%)
7tm_GPCRs 44..335 CDD:475119 90/325 (28%)
TM helix 1 46..70 CDD:410628 6/40 (15%)
TM helix 2 79..101 CDD:410628 10/22 (45%)
TM helix 3 117..139 CDD:410628 7/21 (33%)
TM helix 4 162..178 CDD:410628 5/15 (33%)
TM helix 5 210..233 CDD:410628 4/22 (18%)
TM helix 6 265..287 CDD:410628 9/24 (38%)
TM helix 7 303..328 CDD:410628 8/24 (33%)

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