DRSC/TRiP Functional Genomics Resources

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Protein Alignment TkR86C and Prlhr

DIOPT Version :10

Sequence 1:NP_001097741.1 Gene:TkR86C / 41286 FlyBaseID:FBgn0004841 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_631932.4 Gene:Prlhr / 246075 RGDID:71037 Length:370 Species:Rattus norvegicus


Alignment Length:330 Identity:94/330 - (28%)
Similarity:165/330 - (50%) Gaps:49/330 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 SPTRPYELPWEQKTIWAIIFGLMMFVAIAGNGIVLWIVTGHRSMRTVTNYFLLNLSIADLLMSSL 135
            :|.:..:|..:.|.:..:::.:::.|.:.||.:::.::...|.:..|||:.:.||:::|:||.:.
  Rat    48 TPFQSLQLVHQLKGLIVMLYSIVVVVGLVGNCLLVLVIARVRRLHNVTNFLIGNLALSDVLMCAA 112

  Fly   136 NCVFNFIFMLN-SDWPFGSIYCTINNFVANVTVSTSVFTLVAISFDRYIAIVHPLKRRTSRRKVR 199
            .......:... ..|.||...|.:..|:..|||..|||||..|:.|||:.:||||:||.|.:...
  Rat   113 CVPLTLAYAFEPRGWVFGGGLCHLVFFLQPVTVYVSVFTLTTIAVDRYVVLVHPLRRRISLKLSA 177

  Fly   200 IILVLIWALSCVLSAPCLLYSSIMTKHYYNGKSR----TVCFMMWPDGRYPTSMADYAYNLIILV 260
            ..::.|||||.||:.|..:       |.|:.:.:    .:|...|  |........||:.|  |:
  Rat   178 YAVLGIWALSAVLALPAAV-------HTYHVELKPHDVRLCEEFW--GSQERQRQIYAWGL--LL 231

  Fly   261 LTYGIPMIVMLICY-----SLMGRVLWGSRSIGE-NTDRQMESMKSKRKVVRMFIAIVSIFAICW 319
            .||.:|::.:|:.|     .|..||:.||.:..: :.||     ..:|:...:.:.:|.:||:||
  Rat   232 GTYLLPLLAILLSYVRVSVKLRNRVVPGSVTQSQADWDR-----ARRRRTFCLLVVVVVVFAVCW 291

  Fly   320 LPYHLFFI-----------YAYHNNQVASTKYVQHMYLGFYWLAMSNAMVNPLIYYWMNKRFRMY 373
            ||.|:|.:           ||:...|:..           :|||||:|..||.||.|::..||..
  Rat   292 LPLHIFNLLRDLDPRAIDPYAFGLVQLLC-----------HWLAMSSACYNPFIYAWLHDSFREE 345

  Fly   374 FQRII 378
            .::::
  Rat   346 LRKML 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TkR86CNP_001097741.1 7tmA_TACR 84..374 CDD:320512 91/311 (29%)
TM helix 1 85..111 CDD:320512 3/25 (12%)
TM helix 2 118..144 CDD:320512 7/25 (28%)
TM helix 3 156..186 CDD:320512 14/29 (48%)
TM helix 4 197..218 CDD:320512 8/20 (40%)
TM helix 5 251..280 CDD:320512 10/33 (30%)
TM helix 6 299..329 CDD:320512 10/40 (25%)
TM helix 7 342..367 CDD:320512 11/24 (46%)
PrlhrNP_631932.4 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..34
7tmA_PrRP_R 61..346 CDD:320516 91/311 (29%)
TM helix 1 62..88 CDD:320516 3/25 (12%)
TM helix 2 95..120 CDD:320516 7/24 (29%)
TM helix 3 134..164 CDD:320516 14/29 (48%)
TM helix 4 175..196 CDD:320516 8/20 (40%)
TM helix 5 222..251 CDD:320516 9/30 (30%)
TM helix 6 271..301 CDD:320516 10/29 (34%)
TM helix 7 314..339 CDD:320516 12/35 (34%)
Required for interaction with GRIP1, GRIP2 and PICK1. /evidence=ECO:0000250 365..370
Blue background indicates that the domain is not in the aligned region.

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