DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TkR86C and npr-4

DIOPT Version :10

Sequence 1:NP_001097741.1 Gene:TkR86C / 41286 FlyBaseID:FBgn0004841 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_001300304.1 Gene:npr-4 / 182684 WormBaseID:WBGene00007635 Length:490 Species:Caenorhabditis elegans


Alignment Length:513 Identity:112/513 - (21%)
Similarity:214/513 - (41%) Gaps:104/513 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 ILAVRRFELNSIVNTTLLGS-LNRTEVVSLLSSIIDNRDNLESINEAKDFLTECLFPSPTRPYEL 78
            :|.:....:.:|......|. :|.::.::|.|.:...|::|.|                      
 Worm     2 LLEIGTITIGNITRARKFGERMNGSDCLNLNSELWLYREDLSS---------------------- 44

  Fly    79 PWEQKTIWAIIFGLMMFVAIAGNGIVLWIVTGHRSMRTVTNYFLLNLSIADLLMSSLNCVFNFIF 143
            .|....::|.::.:::...|.||..|:..:|.::|::||.|.|:|:||.:|:::...:.....|.
 Worm    45 RWYIMLVFAFLYLIIIAAGIIGNSCVILAITRNKSLQTVPNLFILSLSCSDIVVCCTSATITPIT 109

  Fly   144 MLNSDWPFGSIYCTINNFVANVTVSTSVFTLVAISFDRYIAIVHPLKRRTSRRKVRIILVLIWAL 208
            ....:|.||...|.|..|:|.:::..|.|||.|||.||||.|..|:::..:..:...::.:|.|.
 Worm   110 AFKKEWIFGEALCRIAPFIAGISLCFSTFTLTAISIDRYILIRFPMRKPITHYQAVGVIAIICAF 174

  Fly   209 SCVLSAPCLLYSSIMTKHYYNGKSRTVCFMMWPDGRYPT------SMADYAYNLIILVLTYGIPM 267
            :..:::|.:....:       |:....|      |:|.|      ......|...::.|...||:
 Worm   175 AATITSPIMFKQKL-------GEFENFC------GQYCTENWGANESQRKIYGAALMFLQLVIPL 226

  Fly   268 IVMLICYSLM------GRVLWGSRSIG------ENTDRQMESMKSKRKVVRMFIAIVSIFAICWL 320
            .:::|.|:.:      ..:|.|::...      |.:|:|..::|.:::..||.|.:|..||..|:
 Worm   227 TIIIISYTAISLKIGQSMILKGAKKQKTDNWEMELSDQQRIAVKRRQRTNRMLIGMVVAFACSWI 291

  Fly   321 ---PYHLFFIYAYHNNQVASTKYVQHMYLGFYWLAMSNAMVNPLIYYWMNKRFRMYFQRIICCCC 382
               .:::...|.|....:.:.:|:  ..:..:.:||::.:.|||:|..:|.:.|..|   |....
 Worm   292 WSVTFNILRDYEYLPELIKTQEYI--FGIATHCIAMTSTVWNPLLYAVLNLQLRAAF---IDLMP 351

  Fly   383 VGLTRH----------RFDSPKSRLTNKNSSNRHTRGGYTVAHSLPNSSPPTTQTLLAVLAQTLT 437
            ..|.||          ..:.|...:|||..|.                   .|:|:.|....|..
 Worm   352 HWLRRHLNLEGDNSSPLLNHPTMTITNKYGST-------------------ATKTVKATYINTSN 397

  Fly   438 -QPKPQTQLLLSHHSPHPTQPSAAETKSQWKRSTMETQIQQAPVTSSCREQRSAQQQQ 494
             ||...|.|:   ....|..||.....|..|:|.|...:.|         :|:|::::
 Worm   398 GQPYVSTSLV---GKVQPEAPSFKFNGSGRKKSAMMRILVQ---------KRNAEEEE 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TkR86CNP_001097741.1 7tmA_TACR 84..374 CDD:320512 74/310 (24%)
TM helix 1 85..111 CDD:320512 6/25 (24%)
TM helix 2 118..144 CDD:320512 7/25 (28%)
TM helix 3 156..186 CDD:320512 15/29 (52%)
TM helix 4 197..218 CDD:320512 3/20 (15%)
TM helix 5 251..280 CDD:320512 6/34 (18%)
TM helix 6 299..329 CDD:320512 8/32 (25%)
TM helix 7 342..367 CDD:320512 6/24 (25%)
npr-4NP_001300304.1 7tmA_NPYR-like 50..346 CDD:320331 74/310 (24%)
TM helix 1 51..77 CDD:320331 6/25 (24%)
TM helix 2 84..109 CDD:320331 6/24 (25%)
TM helix 3 122..152 CDD:320331 15/29 (52%)
TM helix 4 163..184 CDD:320331 3/20 (15%)
TM helix 5 210..239 CDD:320331 6/28 (21%)
TM helix 6 270..300 CDD:320331 8/29 (28%)
TM helix 7 314..339 CDD:320331 7/26 (27%)

Return to query results.
Submit another query.