DRSC/TRiP Functional Genomics Resources

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Protein Alignment TkR86C and tkr-3

DIOPT Version :9

Sequence 1:NP_001097741.1 Gene:TkR86C / 41286 FlyBaseID:FBgn0004841 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_001343603.1 Gene:tkr-3 / 177285 WormBaseID:WBGene00006428 Length:400 Species:Caenorhabditis elegans


Alignment Length:389 Identity:101/389 - (25%)
Similarity:181/389 - (46%) Gaps:47/389 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 VVSLLSSIIDNRDNLESINEAK-----DFLTECLFPSPTRPYELPWEQKTIWAIIFGLMMFVAIA 99
            :.|.::::|.....|....||:     ||            |||...:..||.:::.::.|:|:.
 Worm    10 LASTITTVIGGAGVLAEAGEAELSGDDDF------------YELTPVELIIWCMLYAIIAFMAVV 62

  Fly   100 GNGIVLWIVTGHRSMRTVTNYFLLNLSIADLLMSSLNCVFNFIFMLNSDWPFGSIYCTINNFVAN 164
            ||.:||:|......:|::|.||:|||..|||........|.|...|..:|......|.|..:|..
 Worm    63 GNLLVLYITLFRLRVRSITTYFILNLGFADLFTGIFAIPFKFQAALFQEWFLPRSLCRIVPYVET 127

  Fly   165 VTVSTSVFTLVAISFDRYIAIVHPLKRRTSRRKVRIILVLIWALSCVLSAPCLLYSSIMTKHYYN 229
            |.::.||||||..:...:..:......:.|.|..:..::|||.::.::|.|..|:.:.......|
 Worm   128 VALTVSVFTLVTSAVHEFRTMFFSKCSQMSPRSAKRCVLLIWIMAVLVSLPHGLFHNTYEFPDDN 192

  Fly   230 GKSRTVCFMMWPD-GRYPTSMADYAYNLIILVLTYGIPMIVMLICYSLMGRVLWG-SRSIGENTD 292
            ..|...|..::|| |.:.|      ||:.::::.|.:|||::...|:::...:|. |:|..|..:
 Worm   193 NTSIVQCLPVYPDAGWWKT------YNVYLVIIQYFVPMIILDTAYTMIAVKIWSLSQSRVELDE 251

  Fly   293 RQMESMK-----------SKRKVVRMFIAIVSIFAICWLPYHLFFIYAYHNNQVASTKYVQHMYL 346
            .:|.:.|           ...:::|..|.:|:.|::||.|...:.:......::...||:..::.
 Worm   252 TKMATQKISVVSMVSPNTQLSQLMRTLIIVVACFSLCWFPLETYLLLNELKPEINGWKYINLVFF 316

  Fly   347 GFYWLAMSNAMVNPLIY------YWMNKRFRMYFQRIICCCCVGLTRHRFDSPKSRLTNKNSSN 404
            ..:||||||:.:||:||      |  |:.:|..|::|   .|:...:...|.........||||
 Worm   317 FSHWLAMSNSCLNPIIYGLYNTKY--NEEYRRLFRQI---GCIWQRQKSLDDSMKPERRWNSSN 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TkR86CNP_001097741.1 7tm_4 92..376 CDD:304433 82/302 (27%)
7tm_1 100..363 CDD:278431 74/275 (27%)
tkr-3NP_001343603.1 7tm_GPCRs 47..344 CDD:391938 82/304 (27%)
TM helix 1 48..74 CDD:341315 9/25 (36%)
TM helix 2 81..106 CDD:341315 11/24 (46%)
TM helix 3 119..149 CDD:341315 10/29 (34%)
TM helix 4 160..181 CDD:341315 5/20 (25%)
TM helix 5 209..238 CDD:341315 8/34 (24%)
TM helix 6 254..299 CDD:341315 9/44 (20%)
TM helix 7 312..337 CDD:341315 10/24 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X257
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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