DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TkR86C and Ptgdr2

DIOPT Version :9

Sequence 1:NP_001097741.1 Gene:TkR86C / 41286 FlyBaseID:FBgn0004841 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_034092.1 Gene:Ptgdr2 / 14764 MGIID:1330275 Length:382 Species:Mus musculus


Alignment Length:380 Identity:89/380 - (23%)
Similarity:165/380 - (43%) Gaps:68/380 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 IIFGLMMFVAIAGNGIVLWIVTGHRSMRTVTNYFLLNLSIADLLMSSLNCVFNFIFMLNSDWPFG 152
            ::.||...:.:..||::|::| |.|..:||...::|:|:::|||.::....|.:...:...|..|
Mouse    36 LLHGLASLLGLVENGLILFVV-GCRMRQTVVTTWVLHLALSDLLAAASLPFFTYFLAVGHSWELG 99

  Fly   153 SIYCTINNFVANVTVSTSVFTLVAISFDRYIAIVHPL---KRRTSRRKVRIILVLIWALSCVLSA 214
            :.:|.:::.|..:.:..|.|.|.|||.||.:.:|.|:   ..||.....|:.|:| |||:.:.:.
Mouse   100 TTFCKLHSSVFFLNMFASGFLLSAISLDRCLQVVRPVWAQNHRTVAVAHRVCLML-WALAVLNTI 163

  Fly   215 PCLLYSSIMTK------HYYNGKSRTVCFMMWPDGRYPTSMADYAYNLIIL---VLTYGIPMIVM 270
            |..::...:.:      .|||       .::|..|....:..||....:.:   :|.:.:|:.::
Mouse   164 PYFVFRDTIPRLDGRIMCYYN-------LLLWNPGPDRDTTCDYRQKALAVSKFLLAFMVPLAII 221

  Fly   271 LICYSLMGRVLWGSRSIGENTDRQMESMKSKRKVVRMFIAIVSIFAICWLPYHLFFIYAYHNNQV 335
                        .|..:..:........:...:.||:..|||..|.:||.|||:|.:.....:.|
Mouse   222 ------------ASSHVAVSLRLHHRGRQRTGRFVRLVAAIVVAFVLCWGPYHIFSLLEARAHSV 274

  Fly   336 ASTKYVQHMYLGFYW-LAMSNAMVNPLIY--------YWMNKRFRMYFQRIICCCCVGLTRHRFD 391
            .:.:.:....|.|.. ||..|::||||:|        |.:.:..|...:.::.          .|
Mouse   275 TTLRQLASRGLPFVTSLAFFNSVVNPLLYVFTCPDMLYKLRRSLRAVLESVLV----------ED 329

  Fly   392 SPKSRLTNKNSSNRHTRGGYTVAHSLPNSSPPTTQTLLAVLAQTLTQPKPQTQLL 446
            |.:|             ||........:|:.....|||  ||..:.|.:| |:|:
Mouse   330 SDQS-------------GGLRNRRRRASSTATPASTLL--LADRIPQLRP-TRLI 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TkR86CNP_001097741.1 7tm_4 92..376 CDD:304433 73/304 (24%)
7tm_1 100..363 CDD:278431 69/275 (25%)
Ptgdr2NP_034092.1 7tm_GPCRs 32..314 CDD:391938 73/298 (24%)
TM helix 1 34..58 CDD:341315 6/22 (27%)
TM helix 2 66..87 CDD:341315 5/20 (25%)
TM helix 3 104..126 CDD:341315 6/21 (29%)
TM helix 4 149..165 CDD:341315 6/16 (38%)
TM helix 5 203..226 CDD:341315 3/34 (9%)
TM helix 6 241..266 CDD:341315 12/24 (50%)
TM helix 7 282..307 CDD:341315 10/24 (42%)
Involved in the recycling of CRTH2. /evidence=ECO:0000250 329..332 2/2 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.