DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31278 and PDF1B

DIOPT Version :10

Sequence 1:NP_731494.1 Gene:CG31278 / 41282 FlyBaseID:FBgn0051278 Length:238 Species:Drosophila melanogaster
Sequence 2:NP_196970.1 Gene:PDF1B / 831318 AraportID:AT5G14660 Length:273 Species:Arabidopsis thaliana


Alignment Length:157 Identity:48/157 - (30%)
Similarity:79/157 - (50%) Gaps:17/157 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 DPVLRQQAALVPKEHMASPEIKAIVERMVKVLRKFDCVGIAAPQIGVSLRIIAMEFKGRIRKELP 120
            ||:||.:...:   .:....:|.:|:.|..|:.|.|.:|::|||:|::::::...          
plant    88 DPILRAKNKRI---DIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFN---------- 139

  Fly   121 EAVYQARQMSELPLTIFINPVLTVTNYAKLKHPEGCMSVRGYSAEVERFEGVKLTGLDQLGNQSE 185
                .|.:..|....:.:||.:...:...:...|||:|..|..|||.|.:.||:...|..|.:..
plant   140 ----PAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGERFS 200

  Fly   186 LALSGWNARIAQHEMDHLEGKLYTDHM 212
            ::||...|||.|||.|||||.|:.|.|
plant   201 ISLSRLPARIFQHEYDHLEGVLFFDRM 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31278NP_731494.1 Pep_deformylase 50..214 CDD:426202 48/157 (31%)
PDF1BNP_196970.1 Def 79..240 CDD:440012 48/157 (31%)

Return to query results.
Submit another query.