DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31278 and pdf

DIOPT Version :9

Sequence 1:NP_731494.1 Gene:CG31278 / 41282 FlyBaseID:FBgn0051278 Length:238 Species:Drosophila melanogaster
Sequence 2:NP_001028902.1 Gene:pdf / 619248 ZFINID:ZDB-GENE-050913-42 Length:247 Species:Danio rerio


Alignment Length:246 Identity:95/246 - (38%)
Similarity:135/246 - (54%) Gaps:32/246 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 ILGHCRSFG---------------------------TSPP----ANQSFRKWYQHL-WTTERTNL 45
            ::.|||.|.                           |:.|    .|...|.:.|:: ...:.:.:
Zfish     1 MIRHCRIFSHLVLRSQSSHVHSSPVRILLPLSANTCTASPRTHSTNVKVRSYLQYMKRKVQGSPV 65

  Fly    46 PPYNHFTQIGDPVLRQQAALVPKEHMASPEIKAIVERMVKVLRKFDCVGIAAPQIGVSLRIIAME 110
            |||||..|:||||||..||.|....:..||::.:::.:|||:||.:|||::||||||.|||:|:|
Zfish    66 PPYNHVCQVGDPVLRSHAAEVEPGAIQGPEVQKVIKTLVKVMRKLECVGLSAPQIGVPLRILALE 130

  Fly   111 FKGRIRKELPEAVYQARQMSELPLTIFINPVLTVTNYAKLKHPEGCMSVRGYSAEVERFEGVKLT 175
            :..::.:|...|..:||.:..:||.|||||.|.|.:...:...|.|.|:.||||.|.|:..|:::
Zfish   131 YPKKMLEESSTASVEARGLVAVPLMIFINPQLRVLDGRTVIFQEACESISGYSASVPRYVSVEVS 195

  Fly   176 GLDQLGNQSELALSGWNARIAQHEMDHLEGKLYTDHMDRSTFACTCWEAVN 226
            ||::...:.....|||.|||.|||||||.|.||.||||..||....||..|
Zfish   196 GLNEKAEEVSWKASGWPARILQHEMDHLNGVLYIDHMDSKTFINVKWEEHN 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31278NP_731494.1 Pep_deformylase 50..216 CDD:279645 77/165 (47%)
pdfNP_001028902.1 Pep_deformylase 70..236 CDD:279645 77/165 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596616
Domainoid 1 1.000 155 1.000 Domainoid score I4183
eggNOG 1 0.900 - - E1_COG0242
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H69354
Inparanoid 1 1.050 177 1.000 Inparanoid score I4033
OMA 1 1.010 - - QHG59626
OrthoDB 1 1.010 - - D1532656at2759
OrthoFinder 1 1.000 - - FOG0005148
OrthoInspector 1 1.000 - - otm25926
orthoMCL 1 0.900 - - OOG6_101584
Panther 1 1.100 - - LDO PTHR10458
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R17325
SonicParanoid 1 1.000 - - X4178
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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