DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31278 and pdf

DIOPT Version :10

Sequence 1:NP_731494.1 Gene:CG31278 / 41282 FlyBaseID:FBgn0051278 Length:238 Species:Drosophila melanogaster
Sequence 2:NP_001004979.1 Gene:pdf / 448425 XenbaseID:XB-GENE-1010345 Length:239 Species:Xenopus tropicalis


Alignment Length:232 Identity:98/232 - (42%)
Similarity:132/232 - (56%) Gaps:15/232 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 CQA---ILGHCRSFGTSPPANQSFR---KWY----QHLWTTERTNL-----PPYNHFTQIGDPVL 59
            |:|   :|.||.|.......:..:|   .|.    :..|...:..:     |||:..||.|||||
 Frog     7 CRALTLLLSHCSSALLPNVIHVPYRMSSSWISGKKRSYWRYLKRRVMGPVTPPYSRVTQTGDPVL 71

  Fly    60 RQQAALVPKEHMASPEIKAIVERMVKVLRKFDCVGIAAPQIGVSLRIIAMEFKGRIRKELPEAVY 124
            |..||.||...::.|:.:|:|.:||:|||...|||::||||||.|||:|:.|..::.:.:|..|.
 Frog    72 RCTAARVPCAQISHPDTQAVVNQMVRVLRAGCCVGLSAPQIGVPLRILAVAFPQQMYQAVPPEVR 136

  Fly   125 QARQMSELPLTIFINPVLTVTNYAKLKHPEGCMSVRGYSAEVERFEGVKLTGLDQLGNQSELALS 189
            .||:||..||.|||||.:.:.:...|..||||.||:|:||.|.|:..|:|.|::..|........
 Frog   137 NAREMSPFPLQIFINPEMRIVDSRTLSFPEGCSSVQGFSAVVPRYYAVELQGMNPKGEHVTWQAQ 201

  Fly   190 GWNARIAQHEMDHLEGKLYTDHMDRSTFACTCWEAVN 226
            ||.|||.|||||||:|.||.|.||..||....|..||
 Frog   202 GWAARIIQHEMDHLDGVLYIDKMDPRTFVNISWMEVN 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31278NP_731494.1 Pep_deformylase 50..214 CDD:426202 80/163 (49%)
pdfNP_001004979.1 Pep_deformylase 63..220 CDD:238271 76/156 (49%)

Return to query results.
Submit another query.