DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6465 and pm20d1.2

DIOPT Version :9

Sequence 1:NP_650004.1 Gene:CG6465 / 41274 FlyBaseID:FBgn0037818 Length:401 Species:Drosophila melanogaster
Sequence 2:NP_001070769.1 Gene:pm20d1.2 / 768158 ZFINID:ZDB-GENE-061013-637 Length:522 Species:Danio rerio


Alignment Length:482 Identity:106/482 - (21%)
Similarity:174/482 - (36%) Gaps:113/482 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KWESDEEIQY-------------FREYLRIPSVHPDPDYAPCVEFLRRQAN----------LMDL 46
            |||:...|..             |:..:|||:          |.|.....|          |..:
Zfish    49 KWENTTTISLQLRTQQRQNLLANFKAAIRIPT----------VSFTETHVNTSALQEFDGLLRSV 103

  Fly    47 PMKVYYPANEQNPVV-----VLTWKGLNPELPSILLNSHMDVVPV-FPENWTHPPFGADIDEEGR 105
            ..||:..:..::.||     :.|..|.:.:|...:|.:|:||||. ..:.|..|||.|. :..|.
Zfish   104 FPKVFSSSLVRHEVVGNYSHLFTIAGTDADLEPYMLLAHIDVVPANEADGWDAPPFSAQ-EINGF 167

  Fly   106 IFARGTQDMKSVGMQHLAAVRALKRSGAKFKRTIHISFVADEEMGGRYGMRPFVPTEDFRALNVG 170
            |:.|||.|.|...|..|.|:..|...|...:||.:|....|||:.|.:|....|.....|.:.:.
Zfish   168 IYGRGTIDNKQSVMGILQALEYLLEKGYTPRRTFYIGLGHDEEVNGLHGAVNIVKLLKSRGVKLL 232

  Fly   171 FAMDEGLASPDEQLP--------LFYAERAVWRVYFNISGTAGHGSL------------------ 209
            :.:|||||..|..:.        :..:|:....|..::|.:.||.|:                  
Zfish   233 YVLDEGLAVLDGVISGLDGPAALIGISEKGQTTVKLSVSTSPGHSSMPPRESSIGILASAVRRLE 297

  Fly   210 ------------------LLPNTAGEKLNYIVGKMMEFRRSQVQRLQNNPELVIGDVTTINLTKL 256
                              .|.:..|..|.:|:..:..|.....:.|:..|:......||..:|..
Zfish   298 ENPMPRLFGYGPERSTFEHLAHKFGLPLRFIMSNLWLFSPLLSRVLERKPDTNAFVRTTTAVTMF 362

  Fly   257 GGGVQSNVVPPLLMVCFDCRLALDVDFEEFEANLHKWCADVGGGIEITYEQKQPKVPPTAIDGSN 321
            ..||:.|::|.......:.|:......:|....:....:|....||:             ::|.:
Zfish   363 NSGVKINIIPSYAEAYVNFRIHSAQTLQEVLELVQSTISDDRVKIEM-------------VNGFD 414

  Fly   322 PFWLA-----------FKKATDEM--HISIKPQIFTGGTDSRYIRAVGIPALGFSP---MNNTPV 370
            |..::           .||....|  .:::.|.|..|.||||:.|.:......|:|   ....|.
Zfish   415 PLPISSHDEQSFGFQIIKKTVLGMFPQLTVAPGICVGNTDSRHYRDITQDIYRFAPSWFKPGDPQ 479

  Fly   371 LLHDHDEFIQADIYLRGVQIFQKIISN 397
            ..|..:|.|....|...||.:.:::.|
Zfish   480 RFHGVNERISIQNYEEIVQFYFQLMQN 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6465NP_650004.1 Ac-peptdase-euk 1..401 CDD:273850 106/482 (22%)
M20_AcylaseI_like 8..399 CDD:193524 103/479 (22%)
pm20d1.2NP_001070769.1 PRK08262 14..508 CDD:236208 106/482 (22%)
M20_yscS 69..505 CDD:193549 101/459 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0624
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1432382at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2059
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.850

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