DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6465 and Pm20d1

DIOPT Version :9

Sequence 1:NP_650004.1 Gene:CG6465 / 41274 FlyBaseID:FBgn0037818 Length:401 Species:Drosophila melanogaster
Sequence 2:NP_001102538.1 Gene:Pm20d1 / 498226 RGDID:1564063 Length:503 Species:Rattus norvegicus


Alignment Length:461 Identity:109/461 - (23%)
Similarity:179/461 - (38%) Gaps:86/461 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SDEEIQYFREYL----RIPSV---HPDPDYAPCVEF---LRR------QANLMDLPMKVYYPANE 56
            |:||....:|.|    |||:|   |.:.:.....||   :|:      .:||:            
  Rat    44 SEEERVAMKEALKGAIRIPTVSFSHEESNTTALAEFGEYIRKAFPTVFHSNLI------------ 96

  Fly    57 QNPVV-----VLTWKGLNPELPSILLNSHMDVVPVFPENWTHPPFGADIDEEGRIFARGTQDMKS 116
            |:.||     :||.:|.:|.|...:|.:|.||||...|.|..||| :.:::.|.|..||..|.|:
  Rat    97 QHEVVGKYSHLLTVRGSDPSLQPYMLMAHFDVVPASEEGWEVPPF-SGLEQNGFIHGRGALDNKN 160

  Fly   117 VGMQHLAAVRALKRSGAKFKRTIHISFVADEEMGGRYGMRPFVPTEDFRALNVGFAMDEGLASPD 181
            ..|..|.|:..|.......||...|:...|||:.|..|.:........|.:.:.|.:|||....:
  Rat   161 SVMAVLQALELLLIRKYSPKRPFFIALGHDEEVSGTKGAQQISALLQTRGVQLAFLVDEGSFILE 225

  Fly   182 EQLP--------LFYAERAVWRVYFNISGTAGHGS---------LL-----------LPNTAGE- 217
            :.:|        :...|:....:...::.|.||.|         :|           :||..|. 
  Rat   226 DFIPNLKKPFAMISVTEKGALDLMLQVNMTPGHSSAPPKETSIGILSAAVSRLEQTPMPNMFGNG 290

  Fly   218 ------KL---------NYIVGKMMEFRRSQVQRLQNNPELVIGDVTTINLTKLGGGVQSNVVPP 267
                  ||         |.|:|.:..||....:.::.||.......||..||....|::.||:||
  Rat   291 PLKKTLKLLANEFSFPTNIILGNLWLFRPIVSRVMERNPITNALVRTTTALTMFNAGIKVNVIPP 355

  Fly   268 LLMVCFDCRLALDVDFEEFEANLHKWCADVGGGIEITYEQKQPKVPPTAIDGSNPFWLAFKKATD 332
            |.....:.|:.......|....:....||  ..:::...:....:|.:..|.....:...::...
  Rat   356 LAQATVNFRIHPSQTVHEVVELVQNIVAD--DRVQLHVLRSFEPLPVSPSDDQAMGYQLLQQTIQ 418

  Fly   333 EMHISIK---PQIFTGGTDSRYIRAVGIPALGFSPMNNTP---VLLHDHDEFIQADIYLRGVQIF 391
            .:...:|   |.|..|.||:|:...:......|:|:...|   ..:|..:|.|..:.|...|:..
  Rat   419 SVFPEVKIIVPGICIGNTDTRHYVNLTNGLYRFNPVFLKPQDFSSVHGINEKISVESYQNQVKFI 483

  Fly   392 QKIISN 397
            .::|.|
  Rat   484 FELIQN 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6465NP_650004.1 Ac-peptdase-euk 1..401 CDD:273850 109/461 (24%)
M20_AcylaseI_like 8..399 CDD:193524 109/461 (24%)
Pm20d1NP_001102538.1 PRK08262 4..491 CDD:236208 109/461 (24%)
M20_yscS 53..488 CDD:193549 104/449 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0624
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1432382at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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