Protein Alignment hth and STM

DIOPT Version :10

• Sequence 1: NP_476576.1
• Gene: hth / 41273
• FlyBaseID: FBgn0001235
• Length: 487
• Species: Drosophila melanogaster
• Sequence 2: NP_176426.1
• Gene: STM / 842534
• AraportID: AT1G62360
• Length: 382
• Species: Arabidopsis thaliana
• Alignment Length: 491
• Identity: 103/491 - (20%)
• Similarity: 156/491 - (31%)
• Gaps: 174/491 - (35%)

  Fly    15 MDSGAAAAAMYDPHAGHRPPG-----LQGLPSHHSPHMTHAAAAAATVGMHGYHSGAGGHGTPSH 74
            |:||:.:.:.....||....|     :..:|    |.||          .|.:|.....|....|
plant     1 MESGSNSTSCPMAFAGDNSDGPMCPMMMMMP----PIMT----------SHQHHGHDHQHQQQEH 51

  Fly    75 VSPVGNHLMGAIPEVHKRDKDAIYEHPLFPLLAL---IFEKCELATCTP--------REPGVQGG 128
                    .|...:.|.:...:::...|.|....   :......::|.|        ....|.||
plant    52 --------DGYAYQSHHQQSSSLFLQSLAPPQGTKNKVASSSSPSSCAPAYSLMEIHHNEIVAGG 108

  Fly   129 -DVCSSESFNEDIAMFSKQIRSQKPYYTADPEVDSLMVQAIQVLRFHLLELEKVHELCDNFCHRY 192
             :.|||.|.:..:          |....|.|....|:.                         .|
plant   109 INPCSSSSSSASV----------KAKIMAHPHYHRLLA-------------------------AY 138

  Fly   193 ISCLKGKMPIDLVIDERDTTKPPELGSANGEGRSNADSTSHTDGASTPDVRPPSSSLSYGGAMND 257
            ::|.|             ...|||:.:...|..|:|.:.              ::|:...|.:.:
plant   139 VNCQK-------------VGAPPEVVARLEEACSSAAAA--------------AASMGPTGCLGE 176

  Fly   258 DARSPGAGSTPGPLSQQPPALDTSDPDGKFLSSLNPSELTYDGRWCRREWSSPADARNADASR-- 320
            |                 |.||      :|:.:.....:.|:     :|.|.|.........|
plant   177 D-----------------PGLD------QFMEAYCEMLVKYE-----QELSKPFKEAMVFLQRVE 213

  Fly   321 RLYSSVFLGSPDNFGTSASGDASNASIGSGEGTGEEDDDASGK-----------KNQ-------- 366
            ..:.|:.|.||.:|    ||....|...:..|:.||:.|.:.:           |.|
plant   214 CQFKSLSLSSPSSF----SGYGETAIDRNNNGSSEEEVDMNNEFVDPQAEDRELKGQLLRKYSGY 274

  Fly   367 -----------KKRGIFPKVATNILRAWLFQHLTHPYPSEDQKKQLAQDTGLTILQVNNWFINAR 420
                       :|:|..||.|...|..|..:|...|||||.||..||:.|||...|:||||||.|
plant   275 LGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQR 339

  Fly   421 RRIVQPMIDQSNRAVYTPHPGPSGYGHDAMGYMMDS 456
            :|..:|..|.....:...||      |.   |.||:
plant   340 KRHWKPSEDMQFVVMDATHP------HH---YFMDN 366

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
hth	NP_476576.1	Meis_PKNOX_N	127..211	CDD:465140	13/84 (15%)
		Homeobox_KN	384..422	CDD:428673	21/37 (57%)
STM	NP_176426.1	KNOX1	121..156	CDD:461051	10/82 (12%)
		KNOX2	173..216	CDD:427506	10/70 (14%)
		ELK	262..283	CDD:427504	2/20 (10%)
		Homeobox_KN	303..341	CDD:428673	21/37 (57%)