Protein Alignment hth and BLH2

DIOPT Version :10

• Sequence 1: NP_476576.1
• Gene: hth / 41273
• FlyBaseID: FBgn0001235
• Length: 487
• Species: Drosophila melanogaster
• Sequence 2: NP_195405.4
• Gene: BLH2 / 829840
• AraportID: AT4G36870
• Length: 739
• Species: Arabidopsis thaliana
• Alignment Length: 489
• Identity: 114/489 - (23%)
• Similarity: 179/489 - (36%)
• Gaps: 129/489 - (26%)

  Fly    16 DSGAAAAA-----MYDPHAGHRPPGLQGLP---SHHSPHMTHAAAAAATVGMHGYHSGAGGHGTP 72
            ||..|.||     :.:|....:||......   |||:....|....:.:.             ..
plant   130 DSATATAAAMQLFLMNPPPPQQPPSPSSTTSPRSHHNSSTLHMLLPSPST-------------NT 181

  Fly    73 SHVSPVGNHL-MGAIPEVH-------KRDKDAIYEHPLFPLLALIFEKCELATCTPREPGVQGGD 129
            :|.....||: |..:|..|       :...|..:.|.        ..:.|:.|......|..||.
plant   182 THHQNYTNHMSMHQLPHQHHQQISTWQSSPDHHHHHH--------NSQTEIGTVHVENSGGHGGQ 238

  Fly   130 VCSSESFNEDIAMFSKQIRSQKPYYTADPEVDSLMVQAIQVLRFHLLELEKVHELCDNFCHRYIS 194
            ..|. |.:..:...:|....:..||.|:....|...|..|.........:..|::.:.|.....:
plant   239 GLSL-SLSSSLEAAAKAEEYRNIYYGANSSNASPHHQYNQFKTLLANSSQHHHQVLNQFRSSPAA 302

  Fly   195 CLKGKMPIDLVIDERDTTKPPEL---------G--SANGEGRSNADSTSHTDGASTPDVRPPSSS 248
            .......::::.:.|.||...||         |  ..|..|.|:..:|...||
plant   303 SSSSMAAVNILRNSRYTTAAQELLEEFCSVGRGFLKKNKLGNSSNPNTCGGDG------------ 355

  Fly   249 LSYGGAMNDDARSPGAGSTPGPLSQQPPALDTSD------PDGKFLSSLNPSELTYDGRWCRR-- 305
               ||:      ||   |:.|...:.|| |..||      ...|.|:.|...:..|: .:|.:
plant   356 ---GGS------SP---SSAGANKEHPP-LSASDRIEHQRRKVKLLTMLEEVDRRYN-HYCEQMQ 406

  Fly   306 ----------------EWSSPAD---------ARNADASRRLYSSVFLGSPDNFGTSASGDASNA 345
                            .:::.|.         .::|.|::...|...||..|..|.|:||
plant   407 MVVNSFDIVMGHGAALPYTALAQKAMSRHFRCLKDAVAAQLKQSCELLGDKDAAGISSSG----- 466

  Fly   346 SIGSGEGTGEEDDDASGKKN--------------QKKRGIFPKVATNILRAWLFQHLTHPYPSED 396
             :..||.......:.|.::|              :.:||: |:.:.||||||||:|..|||||:.
plant   467 -LTKGETPRLRLLEQSLRQNRAFHQMGMMEQEAWRPQRGL-PERSVNILRAWLFEHFLHPYPSDA 529

  Fly   397 QKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQ 430
            .|..||:.|||:..||:|||||||.|:.:||:::
plant   530 DKHLLARQTGLSRNQVSNWFINARVRLWKPMVEE 563

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
hth	NP_476576.1	Meis_PKNOX_N	127..211	CDD:465140	14/83 (17%)
		Homeobox_KN	384..422	CDD:428673	23/37 (62%)
BLH2	NP_195405.4	POX	310..445	CDD:214728	30/160 (19%)
		Homeobox_KN	517..555	CDD:428673	23/37 (62%)