DRSC/TRiP Functional Genomics Resources

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Protein Alignment hth and KNAT5

DIOPT Version :9

Sequence 1:NP_476576.1 Gene:hth / 41273 FlyBaseID:FBgn0001235 Length:487 Species:Drosophila melanogaster
Sequence 2:NP_194932.1 Gene:KNAT5 / 829335 AraportID:AT4G32040 Length:383 Species:Arabidopsis thaliana


Alignment Length:368 Identity:76/368 - (20%)
Similarity:126/368 - (34%) Gaps:124/368 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 VSPVGNHLMGAIPEVHKRD---KDAIYEHPLFPLLALIFEKC-ELATCTPREPGVQGGDVCSSES 135
            |:..|..::|.:.....|.   |.||..||::..|......| .:||...:.|.:.         
plant    97 VNADGETILGVVGGEDWRSASYKAAILRHPMYEQLLAAHVACLRVATPVDQIPRID--------- 152

  Fly   136 FNEDIAMFSKQIRSQKPYYTA------DPEVDSLMVQAIQVLRFHLLELEKVHELCDNFCHRYIS 194
                 |..| |:.:....|:.      :.|:|..|...:.:|.....:|:  |.:|.:......:
plant   153 -----AQLS-QLHTVAAKYSTLGVVVDNKELDHFMSHYVVLLCSFKEQLQ--HHVCVHAMEAITA 209

  Fly   195 CLKGKMPIDLVIDERDTTKPPELGSANGEGRSNADSTSHTDGASTPDVRPPSSSLSYGGAMNDDA 259
            |.:        |::       .|.|..|                   |.|..|:   |..|:|| 
plant   210 CWE--------IEQ-------SLQSLTG-------------------VSPSESN---GKTMSDD- 236

  Fly   260 RSPGAGSTPGPLSQQPPALDTSDPDGKFLSSLNPSELTYDGRWCRREWSSPADARNADASRRLYS 324
                                  :.|.:..|.:|..:.:.||..|                     
plant   237 ----------------------EDDNQVESEVNMFDGSLDGSDC--------------------- 258

  Fly   325 SVFLGSPDNFGTSASGDASNASIGS---------GEGTGEEDDDASGKKNQKKR-GIFPKVATNI 379
              .:|    ||.....:...:.:..         .:|..|:..|...:..:|:| |..|...|::
plant   259 --LMG----FGPLVPTERERSLMERVKKELKHELKQGFKEKIVDIREEIMRKRRAGKLPGDTTSV 317

  Fly   380 LRAWLFQHLTHPYPSEDQKKQLAQDTGLTILQVNNWFINARRR 422
            |:.|...|...|||:|:.|.:|.|:|||.:.|:||||||.|:|
plant   318 LKEWWRTHSKWPYPTEEDKAKLVQETGLQLKQINNWFINQRKR 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hthNP_476576.1 Meis_PKNOX_N 127..211 CDD:406806 13/89 (15%)
Homeobox_KN 383..422 CDD:399131 20/38 (53%)
KNAT5NP_194932.1 KNOX1 117..156 CDD:397730 11/52 (21%)
KNOX2 170..221 CDD:397731 11/67 (16%)
Homeobox_KN 321..360 CDD:399131 20/38 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0773
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11850
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X78
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.000

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