DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hth and BLH1

DIOPT Version :9

Sequence 1:NP_476576.1 Gene:hth / 41273 FlyBaseID:FBgn0001235 Length:487 Species:Drosophila melanogaster
Sequence 2:NP_001031490.1 Gene:BLH1 / 818167 AraportID:AT2G35940 Length:680 Species:Arabidopsis thaliana


Alignment Length:366 Identity:84/366 - (22%)
Similarity:130/366 - (35%) Gaps:129/366 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 KPPELGSANGEGR-----SNADSTSHTDG----------------------ASTPDVRPPSS--S 248
            :|..:|..:|.|.     |.:..:..|:|                      |.:.|:...|.  |
plant   158 QPIHVGFGSGHGEDIRVGSGSTGSGVTNGIANLVSSKYLKAAQELLDEVVNADSDDMNAKSQLFS 222

  Fly   249 LSYGGAMND------DARSPGAGSTPG--PLSQQPPALDTSDPDGKFLSSLNPSELTYDGRWCRR 305
            ...|...||      .|.:.|.||..|  ...::|..|.|::.....:.....|.:.::.....|
plant   223 SKKGSCGNDKPVGESSAGAGGEGSGGGAEAAGKRPVELGTAERQEIQMKKAKLSNMLHEVEQRYR 287

  Fly   306 EWS-------SPADARNADASRRLYSSVFLGSPDN----FGTSASGD--ASNASIGSGEGTGEED 357
            ::.       |..:......|.:.|:|:.|.:...    ...:.:|.  |:|.|:|       |:
plant   288 QYHQQMQMVISSFEQAAGIGSAKSYTSLALKTISRQFRCLKEAIAGQIKAANKSLG-------EE 345

  Fly   358 DDASG---------------KKNQK------------------KRGIFPKVATNILRAWLFQHLT 389
            |..||               .:.|:                  :||: |:.|.::||||||:|..
plant   346 DSVSGVGRFEGSRLKFVDHHLRQQRALQQLGMIQHPSNNAWRPQRGL-PERAVSVLRAWLFEHFL 409

  Fly   390 HPYPSEDQKKQLAQDTGLTILQVNNWFINARRRIVQPMI-----------------------DQS 431
            ||||.:..|..||:.||||..||:|||||||.|:.:||:                       |||
plant   410 HPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYMEEMKEQAKNMGSMEKTPLDQS 474

  Fly   432 N-----RAVYTPHPGPSGYGHDAMGYMMDSQAHMMHRPPGD 467
            |     ::.......|          |.|:..||.....||
plant   475 NEDSASKSTSNQEKSP----------MADTNYHMNPNHNGD 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hthNP_476576.1 Meis_PKNOX_N 127..211 CDD:406806
Homeobox_KN 383..422 CDD:399131 24/38 (63%)
BLH1NP_001031490.1 POX 190..332 CDD:400075 22/141 (16%)
Homeobox_KN 403..442 CDD:399131 24/38 (63%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 60 1.000 Domainoid score I3843
eggNOG 1 0.900 - - E1_KOG0773
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm2647
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11850
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X78
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.000

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