DRSC/TRiP Functional Genomics Resources

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Protein Alignment hth and PKNOX1

DIOPT Version :9

Sequence 1:NP_476576.1 Gene:hth / 41273 FlyBaseID:FBgn0001235 Length:487 Species:Drosophila melanogaster
Sequence 2:NP_004562.2 Gene:PKNOX1 / 5316 HGNCID:9022 Length:436 Species:Homo sapiens


Alignment Length:388 Identity:149/388 - (38%)
Similarity:195/388 - (50%) Gaps:98/388 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 DKDAIYEHPLFPLLALIFEKCELATCTPREPGVQGGDVCSSESFNEDIAMF-SKQIRSQKPYYTA 156
            ||.|||.|||||||||:|||||.:|        ||.:..:|.||:.||..| .||.:..||::..
Human    54 DKQAIYRHPLFPLLALLFEKCEQST--------QGSEGTTSASFDVDIENFVRKQEKEGKPFFCE 110

  Fly   157 DPEVDSLMVQAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLVIDERDTTKPPELGSAN 221
            |||.|:|||:||||||.||||||||:|||.:||.|||:|||.||       ..:|....|.||..
Human   111 DPETDNLMVKAIQVLRIHLLELEKVNELCKDFCSRYIACLKTKM-------NSETLLSGEPGSPY 168

  Fly   222 GEGRSNADSTSHTDGASTPDVRPPSSSLSYGGAMNDDARSPGAGSTPGPLSQQPPALDTSDPDGK 286
            ...:|....::.|...|...:..|:|:|..|..    |.:..||.|    ..||..:.|  |.|:
Human   169 SPVQSQQIQSAITGTISPQGIVVPASALQQGNV----AMATVAGGT----VYQPVTVVT--PQGQ 223

  Fly   287 FLS-SLNPSELTYDGRWCRREWSSPADARNADASRRLYSSVFLGSPDNFGTSASGDASNASIGSG 350
            .:: :|:|..:.               .:|:....:|...:.:                      
Human   224 VVTQTLSPGTIR---------------IQNSQLQLQLNQDLSI---------------------- 251

  Fly   351 EGTGEEDDDASGKKNQKKRGIFPKVATNILRAWLFQHLTHPYPSEDQKKQLAQDTGLTILQVNNW 415
                ...||.|.|   .|||:.||.|||::|:|||||:.||||:||:|||:|..|.||:||||||
Human   252 ----LHQDDGSSK---NKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNW 309

  Fly   416 FINARRRIVQPMIDQS-------------NRAVYTPHPGPSGYGHDAMGYMMDSQAHMMHRPP 465
            ||||||||:|||:|.|             ||.|....|              ||.|..:.:||
Human   310 FINARRRILQPMLDSSCSETPKTKKKTAQNRPVQRFWP--------------DSIASGVAQPP 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hthNP_476576.1 Meis_PKNOX_N 127..211 CDD:406806 45/84 (54%)
Homeobox_KN 383..422 CDD:399131 29/38 (76%)
PKNOX1NP_004562.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..49
Meis_PKNOX_N 80..165 CDD:406806 47/91 (52%)
Homeobox_KN 277..316 CDD:399131 29/38 (76%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 401..436
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165152644
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0773
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000410
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X78
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
54.740

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