Protein Alignment hth and Pbx2

DIOPT Version :9

• Sequence 1: NP_476576.1
• Gene: hth / 41273
• FlyBaseID: FBgn0001235
• Length: 487
• Species: Drosophila melanogaster
• Sequence 2: NP_001002828.1
• Gene: Pbx2 / 406164
• RGDID: 1303084
• Length: 430
• Species: Rattus norvegicus
• Alignment Length: 148
• Identity: 40/148 - (27%)
• Similarity: 65/148 - (43%)
• Gaps: 30/148 - (20%)

  Fly   366 QKKRGIFPKVATNILRAWLFQHLTHPYPSEDQKKQLAQDTGLTILQVNNWFINAR---RRIVQPM 427
            ::||..|.|.||.:|..:.:.||::|||||:.|::||:..|:|:.||:|||.|.|   ::.:...
  Rat   245 RRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKF 309

  Fly   428 IDQSNRAVY---------------TPHPGPSGYGHDAMGYMMDSQAHMMHRPPGDPGFHQGYP-- 475
            .:::|  :|               |..|.|.........:.:.....|....||..|  ..||
  Rat   310 QEEAN--IYAVKTAVSVAQGGHSRTSSPTPPSSAGSGGSFNLSGSGDMFLGMPGLNG--DSYPAS 370

  Fly   476 ------HYPPAEYYGQHL 487
                  |......||.::
  Rat   371 QVESLRHSMGPASYGDNI 388

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
hth	NP_476576.1	Meis_PKNOX_N	127..211	CDD:406806
		Homeobox_KN	383..422	CDD:399131	19/41 (46%)
Pbx2	NP_001002828.1	PBC	50..243	CDD:281746
		homeodomain	245..305	CDD:238039	26/59 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166346156
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X78
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.840