DRSC/TRiP Functional Genomics Resources

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Protein Alignment hth and Pknox1

DIOPT Version :10

Sequence 1:NP_476576.1 Gene:hth / 41273 FlyBaseID:FBgn0001235 Length:487 Species:Drosophila melanogaster
Sequence 2:NP_057879.2 Gene:Pknox1 / 18771 MGIID:1201409 Length:436 Species:Mus musculus


Alignment Length:341 Identity:138/341 - (40%)
Similarity:183/341 - (53%) Gaps:71/341 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 DKDAIYEHPLFPLLALIFEKCELATCTPREPGVQGGDVCSSESFNEDIAMF-SKQIRSQKPYYTA 156
            ||.|||.|||||||||:|||||.:|        ||.:..:|.||:.||..| .||.:..||::..
Mouse    54 DKQAIYRHPLFPLLALLFEKCEQST--------QGSEGTTSASFDVDIENFVRKQEKDGKPFFCE 110

  Fly   157 DPEVDSLMVQAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLVIDERDTTKPPELGSAN 221
            |||.|:|||:||||||.||||||||:|||.:||.|||:|||.||       ..:|....|.||..
Mouse   111 DPETDNLMVKAIQVLRIHLLELEKVNELCKDFCSRYIACLKTKM-------NSETLLSGEPGSPY 168

  Fly   222 GEGRSNADSTSHTDGASTPDVRPPSSSLSYGGAMNDDARSPGAGSTPGPLSQQPPALDTSDPDGK 286
            ...:|....::.|...|...:..|:|:|..|..    ..:..||.|    ..||..:.|  |.|:
Mouse   169 SPVQSQQIQSAITGTLSPQGIVVPASALQQGNV----TMATVAGGT----VYQPVTVVT--PQGQ 223

  Fly   287 FLS-SLNPSELTYDGRWCRREWSSPADARNADASRRLYSSVFLGSPDNFGTSASGDASNASIGSG 350
            .:: :|:|..:.               .:|:....:|...:.:                      
Mouse   224 VVTQALSPGTIR---------------IQNSQLQLQLNQDLSI---------------------- 251

  Fly   351 EGTGEEDDDASGKKNQKKRGIFPKVATNILRAWLFQHLTHPYPSEDQKKQLAQDTGLTILQVNNW 415
                ...:|.|.|   .|||:.||.|||::|:|||||:.||||:||:|||:|..|.||:||||||
Mouse   252 ----LHQEDGSSK---NKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNW 309

  Fly   416 FINARRRIVQPMIDQS 431
            ||||||||:|||:|.|
Mouse   310 FINARRRILQPMLDSS 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hthNP_476576.1 Meis_PKNOX_N 127..211 CDD:465140 45/84 (54%)
Homeobox_KN 384..422 CDD:428673 28/37 (76%)
Pknox1NP_057879.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 23..50
Meis_PKNOX_N 80..165 CDD:465140 47/91 (52%)
Homeobox_KN 278..316 CDD:428673 28/37 (76%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 401..436
Blue background indicates that the domain is not in the aligned region.

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