DRSC/TRiP Functional Genomics Resources

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Protein Alignment hth and tgif2

DIOPT Version :9

Sequence 1:NP_476576.1 Gene:hth / 41273 FlyBaseID:FBgn0001235 Length:487 Species:Drosophila melanogaster
Sequence 2:XP_002932897.1 Gene:tgif2 / 100127190 XenbaseID:XB-GENE-876497 Length:266 Species:Xenopus tropicalis


Alignment Length:85 Identity:41/85 - (48%)
Similarity:56/85 - (65%) Gaps:1/85 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   349 SGEGTGEEDDDASGKKNQKKRGIFPKVATNILRAWLFQHLTHPYPSEDQKKQLAQDTGLTILQVN 413
            |||..|..:.|.||.| :|:||..||.|..|||.|||:|..:.||||.:|..|:..|.||:||:.
 Frog    23 SGEDEGSSELDISGAK-RKRRGNLPKDAVKILRDWLFEHRFNAYPSEQEKLSLSGQTNLTVLQIC 86

  Fly   414 NWFINARRRIVQPMIDQSNR 433
            |||||||||::..::.:..:
 Frog    87 NWFINARRRVLPELLRKDGK 106

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hthNP_476576.1 Meis_PKNOX_N 127..211 CDD:406806
Homeobox_KN 383..422 CDD:399131 22/38 (58%)
tgif2XP_002932897.1 Homeobox_KN 56..95 CDD:368670 22/38 (58%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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