DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp12e1 and CYP71A12

DIOPT Version :9

Sequence 1:NP_650003.4 Gene:Cyp12e1 / 41272 FlyBaseID:FBgn0037817 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_180633.3 Gene:CYP71A12 / 817626 AraportID:AT2G30750 Length:497 Species:Arabidopsis thaliana


Alignment Length:510 Identity:124/510 - (24%)
Similarity:211/510 - (41%) Gaps:102/510 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 IYQLCRGLAQKATAVNLEEAKPYADIPGPSKLQLIRAFLPGGLYK-NLPVHEMFLDMNRQYGSIF 79
            ::.|.:.|.:.|..|||.        |.|.:|.||     |.|:: :|..|.....::.:||.:.
plant    17 LFLLKQFLKRTANKVNLP--------PSPWRLPLI-----GNLHQLSLHPHRSLHSLSLRYGPLM 68

  Fly    80 -----RMPSVAGTDLVLTMNPQDYEVIFRNEGQYPYR-RSFEVMDYFKRVH------RREVFDGY 132
                 |:|.     ||::......||:..::.::..| ||       |.||      |..||..|
plant    69 LLHFGRVPI-----LVVSSGEAAQEVLKTHDLKFANRPRS-------KAVHGLMNGGRDVVFGPY 121

  Fly   133 DGLTSGNGPAWGKMRTAVNPILLQPRNAKLYMTNLVQVS------DEFLERIRIIRDPVTQEMPD 191
                   |..|.:|::.....||         ||.:..|      :|..|.|:.:....:....:
plant   122 -------GEYWRQMKSVCILNLL---------TNKMVASFEKIREEELNEMIKKLEKASSSSSSE 170

  Fly   192 DFAVDIRHLVIESICSVAL-NTHLGLLGEQRNNKDIQKLVLALQDVVELG-FQL-DIMPAFWKYL 253
            :.:.....|..:....:|| ..|    .|....:|::|.|..:.::  || |.: |.:||. .::
plant   171 NLSELFVTLPSDVTSRIALGRKH----SEDETARDLKKRVRQIMEL--LGEFPIGDYVPAL-AWI 228

  Fly   254 PMPN-----FKKLMRSLDTITDFCYFHIGNALKRIEEDAKAGTLNE------IGLETSLLEKLAR 307
            ...|     .|::.:....:.|          |.::|..:||...|      :.:|:   ||...
plant   229 DRINGFNARIKEVSQGFSDLMD----------KVVQEHLEAGNHKEDFVDILLSIES---EKSIG 280

  Fly   308 FDRQTAVI--IAMDLLFAGADPTLVTLGGILFSLSKSPDKQARLLEEIRGILPNKDSSLTIENMR 370
            |..|...|  :.:|:...|...:...|..|:..|.::|:...:|.:|||..:....|.:..:::.
plant   281 FQAQRDDIKFMILDMFIGGTSTSSTLLEWIMTELIRNPNVMKKLQDEIRSTIRPHGSYIKEKDVE 345

  Fly   371 NLPYLRACIKEGIRMYPIGPGTL-RRMPHDVVLSGYRVVAGTDVGIAANYQMANMEQFVPKVREF 434
            |:.||:|.|||..|::|..|..| |.:..||.:.||.:.|||:|.|.|.....:...:.|...||
plant   346 NMKYLKAVIKEVFRVHPPLPLILPRLLSEDVKVKGYNIAAGTEVIINAWAIQRDPAIWGPDAEEF 410

  Fly   435 IPERWLRDESNSHLVGETATPFMYLPFGFGPRSCAGKRIVDMMLEIAISRLVRNF 489
            .|||.|....:.|     .....::|||.|.|.|.|..:...::|:.::.||..|
plant   411 KPERHLDSTLDYH-----GKDLNFIPFGSGRRICPGINLALGLVEVTVANLVGRF 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12e1NP_650003.4 p450 63..517 CDD:299894 110/462 (24%)
CYP71A12NP_180633.3 CYP71-like 63..489 CDD:410695 109/451 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.