DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp12e1 and cyp26a1

DIOPT Version :9

Sequence 1:NP_650003.4 Gene:Cyp12e1 / 41272 FlyBaseID:FBgn0037817 Length:522 Species:Drosophila melanogaster
Sequence 2:XP_012822016.1 Gene:cyp26a1 / 548901 XenbaseID:XB-GENE-855583 Length:492 Species:Xenopus tropicalis


Alignment Length:435 Identity:108/435 - (24%)
Similarity:178/435 - (40%) Gaps:90/435 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 REVFDGYDGLTSGNGPAWGKMRTAV----------------NPILLQ--PRNAKLYMTNLVQVSD 172
            |::..|...|.|.:.||  .:||.:                ..:::|  .|.|   :.|.|.:.:
 Frog    98 RQILLGEHKLVSVHWPA--SVRTILGAGCLSNLHDSEHKYTKKVIMQAFSREA---LANYVPLME 157

  Fly   173 EFLERIRIIRDPVTQEMPDDFAVDIRHLVIESICSVALNTHLGLLGEQRNNKDIQKLVLALQDVV 237
            |.|.|      .|...:..|..|.:...:...:..:|:...||...::...:..:.|:.|.:::.
 Frog   158 EELRR------SVNLWLQSDSCVLVYPAIKRLMFRIAMRLLLGCDPQRLGREQEETLLEAFEEMT 216

  Fly   238 ELGFQLDIMPAFWKYLPMPNFKKLMRSLDTITDFCYFHIGNALKRIEEDAKAGTLNE-IGLETSL 301
            ...|.|.|      .:|.....:.:|:.:.|      |     .:|||:.|.....| .|.....
 Frog   217 RNLFSLPI------DVPFSGLYRGLRARNII------H-----AQIEENIKEKLQREPDGQCRDA 264

  Fly   302 LEKLARFDRQTAVII--------AMDLLFAGADPTLVTLGGILFSLSKSPDKQARLLEEIR---- 354
            |:.|....|:|...:        |.:|||.|...|......:...|:...|    :||::|    
 Frog   265 LQLLIDHSRRTGEPVNLQALKESATELLFGGHGTTASAATSLTTFLALHKD----VLEKVRKELE 325

  Fly   355 --GILPNK---DSSLTIENMRNLPYLRACIKEGIRMYPIGPGTLRRMPHDVVLSGYRVVAGTDVG 414
              |:|.||   ...|:||.::.|.|....|||.:|:.|...|..|......||:||::..|.:| 
 Frog   326 SQGLLSNKPEEKKELSIEVLQQLKYTSCVIKETLRLSPPVAGGFRVALKTFVLNGYQIPKGWNV- 389

  Fly   415 IAANYQMANME---QFVPKVREFIPERWLRDESNSHLVGETATPFMYLPFGFGPRSCAGKRIVDM 476
               .|.:|:..   :..|...||.|:|:|     :.|.|:::. |.::|||.|.|.|.||....:
 Frog   390 ---IYSIADTHGEAELFPDKDEFNPDRFL-----TPLPGDSSR-FGFIPFGGGVRCCVGKEFAKI 445

  Fly   477 MLEIAISRLVRNFKIGFDYPIEN---AFKAQFFVQP--NIPFKFK 516
            :|::.|..|.||    .|:.:.|   |.|....:.|  |:|.|||
 Frog   446 LLKVFIVELCRN----CDWELLNGSPAMKTSPIICPVDNLPAKFK 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12e1NP_650003.4 p450 63..517 CDD:299894 108/435 (25%)
cyp26a1XP_012822016.1 p450 41..490 CDD:386267 108/435 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D871849at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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