DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp12e1 and Cyp26b1

DIOPT Version :9

Sequence 1:NP_650003.4 Gene:Cyp12e1 / 41272 FlyBaseID:FBgn0037817 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_851601.2 Gene:Cyp26b1 / 312495 RGDID:631379 Length:512 Species:Rattus norvegicus


Alignment Length:511 Identity:103/511 - (20%)
Similarity:183/511 - (35%) Gaps:127/511 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 ISRQIYQLCRGLAQKATAVNLEEAKPYADIPGPSKLQLI----RAFLPGGLYKNLPVHEMFLDMN 72
            :|:|::|| |..|.:..:..|...|      |.....||    ...|.|..:::        ...
  Rat    28 VSQQLWQL-RWAATRDKSCKLPIPK------GSMGFPLIGETGHWLLQGSGFQS--------SRR 77

  Fly    73 RQYGSIFRMPSVAGTDLVLTMNPQDYEVIFRNEGQY---PYRRSFEVMDYFKRVHRREVFDGYDG 134
            .:||::|: ..:.|..|:.....::...|...|.|.   .:.||..|:                 
  Rat    78 EKYGNVFK-THLLGRPLIRVTGAENVRKILLGEHQLVSTEWPRSARVL----------------- 124

  Fly   135 LTSGNGPAWGKMRTAVNPILLQPRNAKLYMTNLV--QVSDEFLERIR-IIRDPVTQEMPDDFAVD 196
                .||     .|..|.|....||.:...:.:.  :..:.:|.:|: :|:|.:........|::
  Rat   125 ----LGP-----NTVANSIGDIHRNKRKVFSKIFSHEALESYLPKIQLVIQDTLRAWSSQPEAIN 180

  Fly   197 IRHLVIESICSVALNTHLGLLGEQRNNKDIQKLVLALQDVVELGFQLDIMPAFWKYLPMPNFKKL 261
            :..........:|:..   |||.....:|:..|....|..||..|.|.:      .||...::: 
  Rat   181 VYQEAQRLTFRMAVRV---LLGFSIPEEDLGNLFEVYQQFVENVFSLPV------DLPFSGYRR- 235

  Fly   262 MRSLDTITDFCYFHIGNALKRIEEDAKAGTLNEIGLETSLLEKL-----ARFDRQTAVII----- 316
                                    ..:|..:.:.|||.::.|||     ..:.....::|     
  Rat   236 ------------------------GIQARQILQKGLEKAIREKLQCTQGKDYSDALDILIESSKE 276

  Fly   317 -------------AMDLLFAGADPTLVTLGGILFSLSKSPDKQARLLEEIR--GILPNK----DS 362
                         .::|:||....|......::..|.|.|....:|.||:|  |:|...    :.
  Rat   277 HGKEMTMQELKDGTLELIFAAYATTASASTSLIMQLLKHPAVLEKLREELRAQGLLHGGGCPCEG 341

  Fly   363 SLTIENMRNLPYLRACIKEGIRMYPIGPGTLRRMPHDVVLSGYRVVAGTDVGIAANYQMANMEQF 427
            :|.::.:..|.||...|||.:|::....|..|.:.....|.|:::..|..|    .|.:.:....
  Rat   342 TLRLDMLSGLRYLDCVIKEVMRLFTPVSGGYRTVLQTFELDGFQIPKGWSV----MYSIRDTHDT 402

  Fly   428 VP---KVREFIPERWLRDESNSHLVGETATPFMYLPFGFGPRSCAGKRIVDMMLEI 480
            .|   .|..|.|:|:.:..|.     :....|.|||||.|.|:|.||.:..:.|::
  Rat   403 APVFKDVNVFDPDRFSQARSE-----DKDGRFHYLPFGGGVRTCLGKHLAKLFLKV 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12e1NP_650003.4 p450 63..517 CDD:299894 90/456 (20%)
Cyp26b1NP_851601.2 CYP26B1 60..490 CDD:410730 92/472 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D871849at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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