DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp12e1 and cyp-13A1

DIOPT Version :9

Sequence 1:NP_650003.4 Gene:Cyp12e1 / 41272 FlyBaseID:FBgn0037817 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_001369869.1 Gene:cyp-13A1 / 188361 WormBaseID:WBGene00011677 Length:519 Species:Caenorhabditis elegans


Alignment Length:488 Identity:117/488 - (23%)
Similarity:190/488 - (38%) Gaps:72/488 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 IPGPSKLQLIRAFLPGGLYKNLPVHEMFLDMNRQYGSIFRMPSVAGTDLVLTMNPQDYEVIFRNE 105
            :.||....::..|| ..|..|.|......:..:::|.|:.........||::.....:||.....
 Worm    32 VVGPMGFPVLGVFL-NSLDNNFPFPLQCREWTKKFGKIYGFTEGTLKTLVISDPELVHEVFVTQY 95

  Fly   106 GQYPYRRSFEVMDYFKRVHRREVFDGYDGLTSGNGPAWGKMRTAVNPILLQPRNAKLYMTNLVQV 170
            ..:..|:...:....::..|..:|       :..|..|.::|...:|........|||.|    |
 Worm    96 DNFYGRKRNPIQGDSEKEKRTNLF-------AAQGFRWKRLRAISSPTFSNSSLRKLYQT----V 149

  Fly   171 SDEFLERIRIIRDPVTQEMPDDFAVDIRHLVIESICSVALNTHLGLLGEQRNNKDIQKLVLAL-- 233
            .|..||.:|.|..........|.....:...::.|..:|    :|....|.....|..:|..|  
 Worm   150 EDSALELLRHIEKQSAGGKQIDMLKFYQEFTLDVIGRIA----MGQTDSQMFKNPIMPIVSKLFQ 210

  Fly   234 QDVVELGFQLDIMPAF---------WKYLPMPNFKKLMR-SLDTITDFCYFHIGNALKRIEEDAK 288
            .:..:|.....|.|.|         .|.|.:.:|:|:.. :||.|      |  |.:|:.|||.|
 Worm   211 GNFAKLFLIGGIFPTFLVEIIRQILLKNLKVGSFRKINEITLDAI------H--NRIKQREEDQK 267

  Fly   289 AGTLNEIGLETSLL--------EKLARF--------------DRQ--TAVIIAMDLLF--AGADP 327
            .|.  |||.....:        |.:..|              :||  |..|:....:|  ||.|.
 Worm   268 NGI--EIGEPADFIDLFLDAKAEDVEHFGENNGDFSKSTTYTNRQLTTEEIVGQCTVFLIAGFDT 330

  Fly   328 TLVTLGGILFSLSKSPDKQARLLEEIRGILPNKDSSLTIENMRNLPYLRACIKEGIRMYPIGP-G 391
            |.::|....:.|:..|:.|.:|.||:....||.:  :||:.:..|.|:....||.:|:||:|. .
 Worm   331 TALSLSYATYLLATHPEIQKKLQEEVNRECPNPE--VTIDQLSKLKYMECVFKEALRLYPLGAFA 393

  Fly   392 TLRRMPHDVVLSGYRVVAGTDVGIAANYQMANMEQFVPKVREFIPERWLRDESNSHLVGETATPF 456
            ..||...:..|...:|..||.:.:.......:...:.....:|.||||  ...||..:.:.:.  
 Worm   394 NSRRCMRNTKLGNMKVEVGTMIQVDTWTLHTDPNIWGDDAEDFKPERW--QTPNSDQIYQKSG-- 454

  Fly   457 MYLPFGFGPRSCAGKRIVDMMLEIAISRLVRNF 489
             |:|||.|||.|.|.|:..|..:|.:..::|.|
 Worm   455 -YIPFGLGPRQCIGMRLAYMEEKILLVHILRKF 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12e1NP_650003.4 p450 63..517 CDD:299894 111/466 (24%)
cyp-13A1NP_001369869.1 CYP3A-like 64..510 CDD:410678 110/455 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4820
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.860

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