DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp12e1 and Cyp27b1

DIOPT Version :9

Sequence 1:NP_650003.4 Gene:Cyp12e1 / 41272 FlyBaseID:FBgn0037817 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_446215.1 Gene:Cyp27b1 / 114700 RGDID:69192 Length:501 Species:Rattus norvegicus


Alignment Length:477 Identity:142/477 - (29%)
Similarity:213/477 - (44%) Gaps:60/477 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 ADIPGPSKLQ-LIRAFLPGGLYKNLPVHEMFLDMNRQYGSIFRMPSVAGTDLVLTMNPQDYEVIF 102
            :||||||... |...|..|||.:   :||:.:....:||.|: ..|......|...:|...|.:.
  Rat    31 SDIPGPSTPSFLAELFCKGGLSR---LHELQVHGAARYGPIW-SGSFGTLRTVYVADPALVEQLL 91

  Fly   103 RNEGQYPYRRSFEVMDYFKRVHRREVFDGYDGLTSGNGPAWGKMRTAVNPILLQPRNAKLYMTNL 167
            |.|...|.|.||......:|.|:|..     ||.:.:|..|.::|:.:.|:||:|:.|..|...|
  Rat    92 RQESHCPERCSFSSWSEHRRRHQRAC-----GLLTADGEEWQRLRSLLAPLLLRPQAAAGYAGTL 151

  Fly   168 VQVSDEFLERIRIIRDPVTQEMPD---DFAVDIRHLVIESICSVALNTHLGLLGEQRNNKDIQKL 229
            ..|..:.:.|:|..|.. ...:||   |.|.:.....:|.|.:|.|.:.||.| |.....|.:..
  Rat   152 DSVVSDLVRRLRRQRGR-GSGLPDLVLDVAGEFYKFGLEGIGAVLLGSRLGCL-EAEVPPDTETF 214

  Fly   230 VLALQDVVELGFQLDIMPAFW--KYLPMPNFKKLMRSLDTITDFCYFHI----GNALKR----IE 284
            :.|:..|.........||: |  :.:|.| :.:|.|..|.:..|...|:    |.|..|    .|
  Rat   215 IEAVGSVFVSTLLTMAMPS-WLHRLIPGP-WARLCRDWDQMFAFAQKHVEQREGEAAVRNQGKPE 277

  Fly   285 EDAKAGTLNEIGLETSLLEKLARF------DRQTAVIIAMDLLFAGADPTLVTLGGILFSLSKSP 343
            ||...|            ..|..|      ..|:.|....:||.||.|....||...|:.||:.|
  Rat   278 EDLPTG------------HHLTHFLFREKVSVQSIVGNVTELLLAGVDTVSNTLSWALYELSRHP 330

  Fly   344 DKQARLLEEIRG-ILPNKDSSLTIENMRNLPYLRACIKEGIRMYPIGPGTLRRMPHDVVLSGYRV 407
            :.|:.|..||.| :.|...:.|....:..||.|:|.|||.:|:||:.||..|....|:.:..|.:
  Rat   331 EVQSALHSEITGAVNPGSYAHLQATALSQLPLLKAVIKEVLRLYPVVPGNSRVPDRDICVGNYVI 395

  Fly   408 VAGTDVGIAANYQMANMEQFVPKVRE---FIPERWLRDESNSHLVGETATPFMYLPFGFGPRSCA 469
            ...|.|.:.......:..||    ||   |.|.|||.:       |....||..||||||.|||.
  Rat   396 PQDTLVSLCHYATSRDPAQF----REPNSFNPARWLGE-------GPAPHPFASLPFGFGKRSCI 449

  Fly   470 GKRIVDMMLEIAISRLVRNFKI 491
            |:|:.::.|::|:::::.:|::
  Rat   450 GRRLAELELQMALAQILTHFEV 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12e1NP_650003.4 p450 63..517 CDD:299894 131/452 (29%)
Cyp27b1NP_446215.1 CYP27B1 61..496 CDD:410741 129/444 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 196 1.000 Domainoid score I3026
eggNOG 1 0.900 - - E2759_KOG0159
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 200 1.000 Inparanoid score I3706
OMA 1 1.010 - - QHG48087
OrthoDB 1 1.010 - - D185685at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8942
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X156
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.880

Return to query results.
Submit another query.