DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp12e1 and XB984297

DIOPT Version :9

Sequence 1:NP_650003.4 Gene:Cyp12e1 / 41272 FlyBaseID:FBgn0037817 Length:522 Species:Drosophila melanogaster
Sequence 2:XP_002933986.3 Gene:XB984297 / 100145331 XenbaseID:XB-GENE-984298 Length:557 Species:Xenopus tropicalis


Alignment Length:513 Identity:148/513 - (28%)
Similarity:242/513 - (47%) Gaps:38/513 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 RGLAQKATAVNL----EEAKPYADIPGPSKLQ-LIRAFLPGGLYKNLPVHEMFLDMNRQYGSIFR 80
            :|.|....||..    :|.|.:.|:||||.|: |...||.|.|   |..||:.|...:.||.::|
 Frog    65 QGRAVTGAAVGATEGRKEMKEFEDLPGPSLLKNLYYYFLRGYL---LHTHELQLIYKKMYGPLWR 126

  Fly    81 MPSVAGTDLVLTMNPQDYEVIFRNEGQYPYRRSFEVMDYFKRVHRREVFDGYDGLTSGNGPAWGK 145
             ..:....:|...:|:..:.:.|.||:||.|...:|.    :.||.:....|...|. .|..|.:
 Frog   127 -SEIGKYKMVNIADPEVLQRLVRQEGKYPMRNKEDVW----KAHRDKRKLAYGPFTE-EGHQWYQ 185

  Fly   146 MRTAVNPILLQPRNAKLYMTNLVQVSDEFLERIRIIR--DPVTQEMPDDFAVDIRHLVIESICSV 208
            :|:|:|..:|:|..|..|...:.:|..:|::|::.:|  .| :.:|.:|.|..:.....|.|.::
 Frog   186 IRSALNKKMLKPSEAASYAGGINEVVTDFMDRLQDMRKASP-SGDMVNDLANALYRFAFEGISNI 249

  Fly   209 ALNTHLGLLGEQRNNKDIQKLVLALQDVVELGFQLDIMPAF---WKYLPMPNFKKLMRSLDTITD 270
            ...|.:|.|.:| ...:.||.:    |.:...|:..:...|   |....:|.:...:...|.|.|
 Frog   250 VFETRIGCLDKQ-IPPETQKFI----DSIGYMFKNSVYVTFLPHWTRGILPYWDHYIEGWDNIFD 309

  Fly   271 FCYFHIGNALKRIEEDAKAGTLNEIGLETSLLEKLARFDRQTAVIIAMDLLFAGADPTLVTLGGI 335
            |....|...:..|:.....|...|....|.||.. |............:||.||.|.|..||...
 Frog   310 FGKHLIDKKMSEIQSRLDKGEEVEGEYLTYLLSS-ANLTMGEVYGSVCELLLAGVDTTSNTLCWA 373

  Fly   336 LFSLSKSPDKQARLLEEIRGILPNKDSSLTIENMRNLPYLRACIKEGIRMYPIGPGTLRRMPH-D 399
            ::.|::.|:.|..:.||:....| .|.....|::.|:|.||..|||.:|:||:.|...|.:.. :
 Frog   374 MYHLARDPELQQAVYEEVSSAAP-MDRIPVAEDIPNMPLLRGVIKETLRLYPVIPTNARIVSEKE 437

  Fly   400 VVLSGYRVVAGTDVGIAANYQMANMEQFVPKVREFIPERWLRDESNSHLVGETATPFMYLPFGFG 464
            |.:..||....| :.:.::|.:|..|:......:|.|:|||||....|      .||..:|||:|
 Frog   438 VEIGEYRFPKNT-LFVLSHYAIARDEENFEDPLKFKPQRWLRDGGMKH------HPFSSIPFGYG 495

  Fly   465 PRSCAGKRIVDMMLEIAISRLVRNFKIGFDYPIENAFK--AQFFVQPNIPFKFKFIER 520
            .|:|.||||.::.:.:|:||::|.|::.:| |.....|  |:..:.|:.|...:|:||
 Frog   496 VRACLGKRIAELEMHLALSRVIRMFELRWD-PKGEDIKSIARIVLSPSKPVNLQFLER 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12e1NP_650003.4 p450 63..517 CDD:299894 127/461 (28%)
XB984297XP_002933986.3 CYP27A1 118..547 CDD:410739 124/450 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 193 1.000 Domainoid score I3126
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 208 1.000 Inparanoid score I3591
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D185685at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9361
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X156
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.060

Return to query results.
Submit another query.