DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6345 and CDK5RAP1

DIOPT Version :9

Sequence 1:NP_650002.1 Gene:CG6345 / 41271 FlyBaseID:FBgn0037816 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_001352657.1 Gene:CDK5RAP1 / 51654 HGNCID:15880 Length:601 Species:Homo sapiens


Alignment Length:554 Identity:300/554 - (54%)
Similarity:391/554 - (70%) Gaps:17/554 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 KSEPAARATFLERIQRGPGFQDFFAVKPASRLKTDEEEHVDTSVPYLNSIDFNGNGRKVHFEVYG 100
            :.|..||..|..|:..||.||.|  :|.||..:......|:...|||...:..|..|||:.|.||
Human    46 RQEDGARKDFSSRLAAGPTFQHF--LKSASAPQEKLSSEVEDPPPYLMMDELLGRQRKVYLETYG 108

  Fly   101 CQMNTNDTEVVFSILKENGYLRCQEPEEADVIMLVTCAVRDGAEQRIRNRLKHLRAMKNKRSTRR 165
            ||||.||||:.:|||:::||||....:|||||:||||::|:.|||.|.|||..|:|:|.:|...|
Human   109 CQMNVNDTEIAWSILQKSGYLRTSNLQEADVILLVTCSIREKAEQTIWNRLHQLKALKTRRPRSR 173

  Fly   166 HPLQLTLLGCMAERLKEKLLEQEQCVDVIAGPDSYKDLPRLLAISRHYGNSAINVLLSLDETYAD 230
            .||::.:||||||||||::|.:|:.||::||||:|:|||||||::.. |..|.||||||||||||
Human   174 VPLRIGILGCMAERLKEEILNREKMVDILAGPDAYRDLPRLLAVAES-GQQAANVLLSLDETYAD 237

  Fly   231 VMPVRLNSESPTAFVSIMRGCDNMCTYCIVPFTRGRERSRPLASIVAEVKALAE----------- 284
            ||||:.::.:.:|||||||||||||:|||||||||||||||:|||:.|||.|:|           
Human   238 VMPVQTSASATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPIASILEEVKKLSEQVFLPPRPPKV 302

  Fly   285 ---QGVKEVTLLGQNVNSYRDRTAQEEQDSLKATPVPGFSTVYKPKTGGTPFAALLRSVAQAVPD 346
               ||:||||||||||||:||.:..:...::......||:|.||.|.||..||.||..|::..|:
Human   303 LGLQGLKEVTLLGQNVNSFRDNSEVQFNSAVPTNLSRGFTTNYKTKQGGLRFAHLLDQVSRVDPE 367

  Fly   347 MRIRFTSPHPKDFSDEVLEVIRDHPNVCKQLHLPAQSGNTQVLERMRRGYSREAYLELVQHIRQF 411
            |||||||||||||.||||::|.:..|:|||:|||||||:::|||.||||||||||:|||.|||:.
Human   368 MRIRFTSPHPKDFPDEVLQLIHERDNICKQIHLPAQSGSSRVLEAMRRGYSREAYVELVHHIRES 432

  Fly   412 LPNVGLSSDFICGFCGETEEEFQDTVSLIQQVQYNVAYLFAYSMREKTTAHRRYKDDVPINVKNE 476
            :|.|.||||||.||||||||:...||||:::||||:.:|||||||:||.|:.|.|||||..||..
Human   433 IPGVSLSSDFIAGFCGETEEDHVQTVSLLREVQYNMGFLFAYSMRQKTRAYHRLKDDVPEEVKLR 497

  Fly   477 RLQRMVQVFREGATQLHRKMEGQEQLILIEGKSKRSDAHWFGRNDANIKVIVPSIYVPISGDSTA 541
            ||:.::.:|||.||:.::...|..||:|:||.||||.....||||.|:|||.|...:....:...
Human   498 RLEELITIFREEATKANQTSVGCTQLVLVEGLSKRSATDLCGRNDGNLKVIFPDAEMEDVNNPGL 562

  Fly   542 RKSFGVGDFLAVRIEESNSQVLKGTPLELSNITD 575
            |.....||::.|:|..::||.|:|..|..:.:.|
Human   563 RVRAQPGDYVLVKITSASSQTLRGHVLCRTTLRD 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6345NP_650002.1 PRK14329 88..570 CDD:237676 282/495 (57%)
UPF0004 93..196 CDD:279287 58/102 (57%)
TRAM 494..568 CDD:280171 28/73 (38%)
CDK5RAP1NP_001352657.1 UPF0004 88..588 CDD:332448 284/500 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 264 1.000 Domainoid score I1928
eggNOG 1 0.900 - - E1_COG0621
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9502
Inparanoid 1 1.050 579 1.000 Inparanoid score I1030
Isobase 1 0.950 - 0 Normalized mean entropy S2963
OMA 1 1.010 - - QHG54971
OrthoDB 1 1.010 - - D407532at33208
OrthoFinder 1 1.000 - - FOG0005052
OrthoInspector 1 1.000 - - oto89210
orthoMCL 1 0.900 - - OOG6_102063
Panther 1 1.100 - - LDO PTHR43020
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3577
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1514.790

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