DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rrp46 and LOC3291448

DIOPT Version :10

Sequence 1:NP_650001.2 Gene:Rrp46 / 41270 FlyBaseID:FBgn0037815 Length:233 Species:Drosophila melanogaster
Sequence 2:XP_552338.4 Gene:LOC3291448 / 3291448 VectorBaseID:AGAMI1_012867 Length:308 Species:Anopheles gambiae


Alignment Length:200 Identity:45/200 - (22%)
Similarity:72/200 - (36%) Gaps:47/200 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 RQMHCEFNPLSRCDGSVMYSQGATGLIGAVLGPIEVKTQNLSIDGSYLECN--YRPKAGLPQVT- 76
            |:.:.:...:|...||.....|.|.:|.:|..|.|:..||...:...|.|:  :.|.|...:.| 
Mosquito    53 RKYYAKIGVVSTAKGSAYVELGNTKVIVSVFDPREIPKQNKFCELGELFCDLKFSPFASAVRKTH 117

  Fly    77 -----DRIREAAIRDVLELALLSEAHPRSKMSVQIQELEDRGSIDACAVNCACLAMLIGGLPL-K 135
                 :|...||:...|..::.....|..::.|....|||.||..|.|:..|.||:....:|: .
Mosquito   118 QTDARERSMAAALTSALNPSVCRHLFPNLQIDVFANVLEDDGSALAVAITAAGLALGDACVPMFD 182

  Fly   136 YSFAAVHAIINEQGEYVLDPDQSETLHQRASFTFAFDSVEGNLLLIQTKGSFKIAQFNDIECLCL 200
            ...||...::.::  .::||...|                                    |.|||
Mosquito   183 IVTAATAGVLGDR--VIMDPTAEE------------------------------------EALCL 209

  Fly   201 AASAE 205
            |...|
Mosquito   210 AGHTE 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rrp46NP_650001.2 RNase_PH_RRP46 14..211 CDD:206777 44/199 (22%)
LOC3291448XP_552338.4 None

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