Protein Alignment Rrp46 and Exosc6

DIOPT Version :9

• Sequence 1: NP_650001.2
• Gene: Rrp46 / 41270
• FlyBaseID: FBgn0037815
• Length: 233
• Species: Drosophila melanogaster
• Sequence 2: XP_006255676.1
• Gene: Exosc6 / 307850
• RGDID: 1309832
• Length: 312
• Species: Rattus norvegicus
• Alignment Length: 191
• Identity: 53/191 - (27%)
• Similarity: 83/191 - (43%)
• Gaps: 28/191 - (14%)

  Fly     4 PAKMDVEKDKLRQMHCEFNPLSRCDGSVMYSQGATGLIGAVLGPIEVK-------------TQNL 55
            ||..|  ..:||.::.....||:..||.....|.|.::.||.||.:.:             ....
  Rat    68 PAARD--PTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAGAGGEAPA 130

  Fly    56 SIDGSYLECNYR--PKAG----LPQVTDRIRE--AAIRDVLELALLSEAHPRSKMSVQIQELEDR 112
            ::.|..| |::|  |.:|    .||.:...||  .|:::.||.|:....:||:::.|....|||.
  Rat   131 ALRGRLL-CDFRRAPFSGRRRRAPQGSSEDRELGLALQEALEPAVRLGRYPRAQLEVSALLLEDG 194

  Fly   113 GSIDACAVNCACLAMLIGGLPLKYSFAAVHAIINEQG---EYVLDPDQSETLHQRASFTFA 170
            ||..|.|:..|.||:...|:.: |.......:....|   .::|||.:.|..|..|..|.|
  Rat   195 GSALAAALTAAALALADAGVEM-YDLVVGCGLSLTPGPSPTWLLDPTRLEEEHSEAGLTVA 254

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rrp46	NP_650001.2	Rph	10..215	CDD:223761	50/185 (27%)
		RNase_PH_RRP46	14..211	CDD:206777	50/181 (28%)
Exosc6	XP_006255676.1	ECX1	71..299	CDD:131120	51/188 (27%)
		RNase_PH_MTR3	76..300	CDD:206776	50/181 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0689
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG53663
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820