DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Irp-1B and aco2

DIOPT Version :9

Sequence 1:NP_524303.2 Gene:Irp-1B / 41269 FlyBaseID:FBgn0024957 Length:899 Species:Drosophila melanogaster
Sequence 2:NP_001011445.1 Gene:aco2 / 496933 XenbaseID:XB-GENE-1000785 Length:781 Species:Xenopus tropicalis


Alignment Length:887 Identity:244/887 - (27%)
Similarity:372/887 - (41%) Gaps:208/887 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 NFHILEKDVQSILGWSPALKQGSNDVEVS-----------FKPARVILQDFTGVPAVVDFAAM-- 104
            |.:|:.|.:...|..|..:..|..|..|:           .:|.||.:||.|...|::.|.:.  
 Frog    53 NINIVRKRLDRPLTLSEKIVYGHIDDPVTQEVVRGKTYLRLRPDRVAMQDATAQMAMLQFISSGL 117

  Fly   105 -RDAVLDLGGDPEKINPICPADLVIDHSVQV------DFARAPDALAKNQSLEFERNKERFTFL- 161
             |.||              |:.:..||.::.      |..||.|.           |:|.:.|| 
 Frog   118 PRVAV--------------PSTIHCDHLIEAQLGGEKDLKRAKDI-----------NQEVYNFLA 157

  Fly   162 ----KWGAKAFNNMLIVPPGSGIVHQVNLEYLARVVFENDATDGSKILYPDSVVGTDSHTTMING 222
                |:|...:.      |||||:||        ::.||.|..|  :|    ::||||||....|
 Frog   158 TAAAKYGVGFWK------PGSGIIHQ--------IILENYAFPG--VL----LIGTDSHTPNGGG 202

  Fly   223 LGVLGWGVGGIEAEAVMLGQSISMLLPEVIGYKLEGKLSPLVTSTDLVLTITKHLRQLGVVGKFV 287
            ||.:..||||.:|..||.|....:..|.|||.||.|:||...:..|::|.:...|...|..|..|
 Frog   203 LGGICIGVGGADAVDVMAGIPWELKCPNVIGVKLTGQLSGWTSPKDVILKVAGILTVKGGTGAIV 267

  Fly   288 EFYGPGVAELSIADRATISNMCPEYGATVGYFPIDENTLGYMKQTNRSEKKIDIIRQYLKATQQL 352
            |::||||..:|....|||.||..|.|||...||.:.....|:.:|.||        .......:.
 Frog   268 EYHGPGVDSISCTGMATICNMGAEIGATTSVFPYNHRMKKYLDKTGRS--------AIASLADEF 324

  Fly   353 RNYADAAQDPKFTQSITLDLSTVVTSVSGPKRPHDRVSVSDMPEDFKSCLSSPVGFKGFAIAPEA 417
            :::....:..::.|.|.::|..:...::||..|.               |::||...| |:|.: 
 Frog   325 KSHLVPDEGCEYDQLIEINLDELKPHINGPFTPD---------------LANPVSEVG-AVAEQ- 372

  Fly   418 QSAFGEFQWDDGKTYKLHHGSVVIAAITSCTNTSNPSVMLGAGLLAKKAVEKGLSILPYIKTSLS 482
                        |.:.|   .:.:..|.||||:|... |..|..:||:|:..||....  :.:::
 Frog   373 ------------KGWPL---DIRVGLIGSCTNSSYED-MGRAAAVAKQALAHGLKCKS--QFTIT 419

  Fly   483 PGSGVVTYYLKESGVIPYLEKLGFDIVGYGCMTCIGNSGPLEENVVNTIEKNGLVCAGVLSGNRN 547
            |||..:...::..|....|..:|..::...|..|||.   .:...:...|||.:    |.|.|||
 Frog   420 PGSEQIRATIERDGYAAVLRDVGGVVLANACGPCIGQ---WDRKDIKKGEKNTI----VTSYNRN 477

  Fly   548 FEGR--IHPNTRANYLASPLLVIAYAIAGRVDIDFEKEPLGVDANGKNVFLQDIWPTRSEIQEVE 610
            |.||  .:|.|.| ::.||.:|.|.:|||.:..|.||:.| ..|:||...||.     .:..|:.
 Frog   478 FTGRNDANPETHA-FVTSPEIVTALSIAGTLKFDPEKDFL-TGADGKKFKLQP-----PDADELP 535

  Fly   611 NKHVIPAMFQEVYS---------KIELGSQDWQTLQVSEGKLFSWSADSTYIKRPPFFEGMTRDL 666
            .....|.  |:.|.         |::: |...|.||:.|                ||.:...:||
 Frog   536 KSSFDPG--QDTYQHPPKEGSSLKVDV-SPTSQRLQLLE----------------PFDKWDGKDL 581

  Fly   667 PKLQSIQKARCLLFLGDSVTTDHISPAGSIARTSPAARFLSERNITPRDFNSYGSRRGN-DAIMS 730
            ..:|.:.|.:      ...||||||.||      |..:|                 ||: |.|.:
 Frog   582 ENMQILVKVK------GKCTTDHISAAG------PWLKF-----------------RGHLDNISN 617

  Fly   731 RGTFANIRLVNKLVEKTGPRTVHIPSQEELDIFDAAERYREEGTPLVLVVGKDYGSGSSRDWAAK 795
            ......|.|.|.....    ..:..:||...:.|.|..|:..|...|::..::||.||||:.||.
 Frog   618 NLLIGAINLENNKANS----VKNCVNQEYGAVPDTARYYKAHGIKWVVIGDENYGEGSSREHAAL 678

  Fly   796 GPFLLGVKAVIAESYERIHRSNLVGMGIIPLQFLPGQSAETLN----LTGREVYNIALPESGLKP 856
            .|..||.:|:|.:|:.|||.:||...|::||.|......:.::    :|..|:.::|       |
 Frog   679 EPRHLGGRAIITKSFARIHETNLKKQGLLPLTFSDPADYDKIHPEDKITIAELKHLA-------P 736

  Fly   857 GQKIQ---VEADGTVFETILRFDT--EVDITYYKNGGILNYM 893
            |:.::   ...:|:. ||||...|  |..|.:::.|..||.|
 Frog   737 GKPVKCIITHQNGSQ-ETILLNHTFNETQIEWFQAGSALNRM 777

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irp-1BNP_524303.2 PTZ00092 1..899 CDD:240263 244/887 (28%)
AcnA_IRP 86..576 CDD:153136 146/505 (29%)
AcnA_IRP_Swivel 680..849 CDD:238812 49/173 (28%)
aco2NP_001011445.1 aconitase_mito 47..777 CDD:273561 243/885 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D190960at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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