DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Irp-1B and aco1

DIOPT Version :9

Sequence 1:NP_524303.2 Gene:Irp-1B / 41269 FlyBaseID:FBgn0024957 Length:899 Species:Drosophila melanogaster
Sequence 2:XP_012812984.1 Gene:aco1 / 100216202 XenbaseID:XB-GENE-1012108 Length:917 Species:Xenopus tropicalis


Alignment Length:897 Identity:599/897 - (66%)
Similarity:720/897 - (80%) Gaps:12/897 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ANPFAQFEKTFSQAGTTYKYFDLASI-DSKYDQLPYSIRVLLESAVRNCDNFHILEKDVQSILGW 67
            :|||....:....|....|:::|..: ||:|.:||:|||||||:|:||||.|.:.::||::||.|
 Frog    26 SNPFQHLAEPLDPAQQDKKFYNLNKLGDSRYARLPFSIRVLLEAAIRNCDEFLVKKQDVENILNW 90

  Fly    68 SPALKQGSNDVEVSFKPARVILQDFTGVPAVVDFAAMRDAVLDLGGDPEKINPICPADLVIDHSV 132
            .  |.|..| |||.|:|||||||||||||||||||||||||..|||||:.|||:||.|||||||:
 Frog    91 K--LTQHDN-VEVPFRPARVILQDFTGVPAVVDFAAMRDAVKRLGGDPQTINPVCPVDLVIDHSI 152

  Fly   133 QVDFARAPDALAKNQSLEFERNKERFTFLKWGAKAFNNMLIVPPGSGIVHQVNLEYLARVVFEND 197
            ||||.|..|:|.|||.||||||:|||.|||||::||.||.|:||||||:|||||||||||||:.|
 Frog   153 QVDFNRRSDSLQKNQELEFERNRERFEFLKWGSQAFQNMRIIPPGSGIIHQVNLEYLARVVFDQD 217

  Fly   198 ATDGSKILYPDSVVGTDSHTTMINGLGVLGWGVGGIEAEAVMLGQSISMLLPEVIGYKLEGKLSP 262
            .     ..||||:||||||||||:|||||||||||||||||||||.|||:|||||||||.|...|
 Frog   218 G-----YYYPDSLVGTDSHTTMIDGLGVLGWGVGGIEAEAVMLGQPISMVLPEVIGYKLMGNPHP 277

  Fly   263 LVTSTDLVLTITKHLRQLGVVGKFVEFYGPGVAELSIADRATISNMCPEYGATVGYFPIDENTLG 327
            ||||||:|||:||||||:|||||||||:|.|||:|||||||||:|||||||||..:||:|..::.
 Frog   278 LVTSTDIVLTVTKHLRQVGVVGKFVEFFGTGVAQLSIADRATIANMCPEYGATAAFFPVDLVSVQ 342

  Fly   328 YMKQTNRSEKKIDIIRQYLKATQQLRNYADAAQDPKFTQSITLDLSTVVTSVSGPKRPHDRVSVS 392
            |::||.|:|:|:..|::||:|....|::.:..|||.|:|.:.|||||||...||||||.|:||||
 Frog   343 YLQQTGRAEEKVQYIQKYLEAAGLFRDFNNTNQDPDFSQVVELDLSTVVPCCSGPKRPQDKVSVS 407

  Fly   393 DMPEDFKSCLSSPVGFKGFAIAPEAQSAFGEFQWDDGKTYKLHHGSVVIAAITSCTNTSNPSVML 457
            :|..||::||.:..|||||.|.........:|.:::.: |:|.||||||||||||||||||||||
 Frog   408 EMKSDFQNCLGAKQGFKGFQIPQGHHYDKVKFPYNNTE-YELSHGSVVIAAITSCTNTSNPSVML 471

  Fly   458 GAGLLAKKAVEKGLSILPYIKTSLSPGSGVVTYYLKESGVIPYLEKLGFDIVGYGCMTCIGNSGP 522
            |||||||||||.||.:.|||||||||||||||:||::|||.|||.|||||:||||||||||||||
 Frog   472 GAGLLAKKAVEAGLCVKPYIKTSLSPGSGVVTFYLRDSGVQPYLSKLGFDVVGYGCMTCIGNSGP 536

  Fly   523 LEENVVNTIEKNGLVCAGVLSGNRNFEGRIHPNTRANYLASPLLVIAYAIAGRVDIDFEKEPLGV 587
            |.:.||..|.:..||..||||||||||||:||||||||||||.|||||||||.:.|||||:||||
 Frog   537 LPDPVVEAITQGDLVAVGVLSGNRNFEGRVHPNTRANYLASPPLVIAYAIAGTIRIDFEKDPLGV 601

  Fly   588 DANGKNVFLQDIWPTRSEIQEVENKHVIPAMFQEVYSKIELGSQDWQTLQVSEGKLFSWSADSTY 652
            :|.||.::|:||||||.|||.||.::|||.||:|||.|||..::.|..|:....:|:.|...|||
 Frog   602 NAEGKEIYLRDIWPTRDEIQAVERQYVIPGMFKEVYEKIEKVNESWNDLKAPTDELYPWDPKSTY 666

  Fly   653 IKRPPFFEGMTRDLPKLQSIQKARCLLFLGDSVTTDHISPAGSIARTSPAARFLSERNITPRDFN 717
            ||.||||:.:|.:|...:||..|..||.||||||||||||||:|||.|||||:|..|.:|||:||
 Frog   667 IKSPPFFDSLTMELQPPKSITDAYVLLNLGDSVTTDHISPAGNIARNSPAARYLVNRGLTPREFN 731

  Fly   718 SYGSRRGNDAIMSRGTFANIRLVNKLVEKTGPRTVHIPSQEELDIFDAAERYREEGTPLVLVVGK 782
            ||||||||||:|:|||||||||.||.:.|..|.|::.||.|.||||||||||:.:|..|:|:.||
 Frog   732 SYGSRRGNDAVMARGTFANIRLFNKFINKQSPSTIYFPSNETLDIFDAAERYQNDGHNLILLTGK 796

  Fly   783 DYGSGSSRDWAAKGPFLLGVKAVIAESYERIHRSNLVGMGIIPLQFLPGQSAETLNLTGREVYNI 847
            :||||||||||||||||.|:|||:|||||||||||||||||||||:|||:|||.|.|:|:|.|.|
 Frog   797 EYGSGSSRDWAAKGPFLQGIKAVLAESYERIHRSNLVGMGIIPLQYLPGESAEALGLSGQERYTI 861

  Fly   848 ALP-ESGLKPGQKIQVEAD-GTVFETILRFDTEVDITYYKNGGILNYMIRKM 897
            .:| |..|:||..::::.| |..||.|:||||:|::|||:||||||||||||
 Frog   862 VIPEEKDLRPGMNVEIKLDTGKSFEAIMRFDTDVELTYYRNGGILNYMIRKM 913

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irp-1BNP_524303.2 PTZ00092 1..899 CDD:240263 599/897 (67%)
AcnA_IRP 86..576 CDD:153136 351/489 (72%)
AcnA_IRP_Swivel 680..849 CDD:238812 125/168 (74%)
aco1XP_012812984.1 PTZ00092 26..916 CDD:240263 599/897 (67%)
AcnA_IRP 106..590 CDD:153136 351/489 (72%)
AcnA_IRP_Swivel 694..863 CDD:238812 125/168 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 709 1.000 Domainoid score I120
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H1657
Inparanoid 1 1.050 1198 1.000 Inparanoid score I196
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D190960at2759
OrthoFinder 1 1.000 - - FOG0001444
OrthoInspector 1 1.000 - - otm47439
Panther 1 1.100 - - LDO PTHR11670
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X803
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
99.160

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