DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6325 and Dcaf15

DIOPT Version :9

Sequence 1:NP_650000.1 Gene:CG6325 / 41268 FlyBaseID:FBgn0037814 Length:892 Species:Drosophila melanogaster
Sequence 2:NP_001100632.1 Gene:Dcaf15 / 304653 RGDID:1304881 Length:599 Species:Rattus norvegicus


Alignment Length:456 Identity:100/456 - (21%)
Similarity:170/456 - (37%) Gaps:103/456 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 AGQKQQLPYVRVPNRLKLYLKDVMASN-LMEGHIFMGLTACGQYMLSHRVMCNDSSSLNHYSFNM 130
            :||.....:.::|.|:.:.||:::..: |..||||:|.:.||:|:||:    ..||..:.:||  
  Rat    46 SGQLSPRLFRKLPPRVCVSLKNIVDEDFLYAGHIFLGFSKCGRYVLSY----TSSSGDDDFSF-- 104

  Fly   131 GYKYTLYFWLFQPHKRLRHFFSRRLFDDHVVDNIKTVTMTQWKNAQHQILV-------VHG---- 184
             |.|.||:|.|..|.:|:.....|||.|..:.:...:|:.:|.:...:::|       .:|    
  Rat   105 -YIYHLYWWEFNVHSKLKLVRQVRLFQDEEIYSDLYLTVCEWPSDASKVIVFGFNTRSANGMLMN 168

  Fly   185 ---AATEEGEDSYITYVKVPKLG----CLECKKLNDDGPYSFYNAHCLTCHLTVHTKYSSTETDP 242
               .:.|...|.||:.|.||..|    |.:..:.:...|    :|.||.....:||||......|
  Rat   169 MMMMSDENHRDIYISTVAVPPRGRCAACQDASRAHPGDP----SAQCLQHGFMLHTKYQVVYPFP 229

  Fly   243 AFDPKINLLCPERILIISNGFMHMLRIDMDTPAVTSGYLPQQQSLILPSLQAQPQSQSFLLPRSI 307
            .|.|...|...:.:|:.::..:....:.:.:...:|..........||  .|.|.|.....|   
  Rat   230 TFQPAFQLKKDQVVLLNTSYSLVACAVSVHSAGDSSFCQILYDHTALP--PAPPSSPGPWSP--- 289

  Fly   308 LASEEDRSSAAFTGSGSEAESLNEQS------VVARIIADFSDIETEQRSSQPGHNQNESQSGSN 366
                   .:.||...|.|........      .:|:.....:||....:.:: |....|::..|.
  Rat   290 -------EAPAFPSLGVEVAPAQPSGAPEPSPAIAKAKEFVADIFRRAKEAK-GSVLEEARLPSG 346

  Fly   367 VYSSPKAYDKLIFTPHCSPTL-VTGPNSMTLPETTLPVTKPLVNESSPPRRRNHRIVTKFRNGIT 430
            :..|         ...|.|:| :..|:...:|..:.|..:|...|   |...|:   ||....:.
  Rat   347 LGPS---------NSRCRPSLELPAPSGEVVPRASPPAAEPTAPE---PGYINY---TKLHYVLQ 396

  Fly   431 TIDLQSPPIANSMTDKSNAYEFSEDNEKYEKISTFRKRRLAEKKYEFSEDNSENIIPFTKVRLAG 495
            :.:...|                ||..:.:|||                      :||....|.|
  Rat   397 SGEGTEP----------------EDEFEDDKIS----------------------LPFVVTDLRG 423

  Fly   496 R 496
            |
  Rat   424 R 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6325NP_650000.1 DCAF15_WD40 72..272 CDD:291600 57/218 (26%)
Dcaf15NP_001100632.1 DCAF15_WD40 51..259 CDD:405607 57/218 (26%)
PHA03247 <290..383 CDD:223021 19/105 (18%)
DCAF15-CTD 386..598 CDD:411023 14/80 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353071
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2CMHE
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D222668at33208
OrthoFinder 1 1.000 - - FOG0007927
OrthoInspector 1 1.000 - - oto97536
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR28541
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X5879
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.850

Return to query results.
Submit another query.