Sequence 1: | NP_001247023.2 | Gene: | Rfx / 41266 | FlyBaseID: | FBgn0020379 | Length: | 919 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_013277.1 | Gene: | RFX1 / 850873 | SGDID: | S000004166 | Length: | 811 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 576 | Identity: | 126/576 - (21%) |
---|---|---|---|
Similarity: | 223/576 - (38%) | Gaps: | 115/576 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 227 LYHSNSSQTQMTYPFCP--VGDYQGNGQ--------TAYYSTTGQYGTTS--SAGGSSNGAHSTT 279
Fly 280 LPYLVPVEEGILLNGSAHSLSQSQSQSHGRDSPHSLTVSSRDWERDAD--RVNGTNRHWVQEVAY 342
Fly 343 IQEAQSTPQTPTSTTTTHSASGGSLGTGGGGASPDSDQSA-----LGSSNKIASA---TIKWLSR 399
Fly 400 NYETADGVSLPRSTLYNHYMQHCSEHKLEPVNAASFGKLIRSVFSGLRTRRLGTRGNSKYHYYGI 464
Fly 465 RIKPG-----SLLNSQAM------DDKQMLAAGYGPSSDGTGGPG-SGPM------VSVTSSTAG 511
Fly 512 QLTGSNGLGGGHGQRHSNGTKKH---------------------TFKPETYEA---CIQYIGDG- 551
Fly 552 -------------TSALPSFPPIE---LNHSFNSELTLEDVDTFRGLYREHCESFLDAVLNLEFN 600
Fly 601 TVEFLLRDFWRASDNNNLDECEEEKYLSKTKLYLLCHCAEVQKFVREVDYQFYQNTVDVIIPDVL 665
Fly 666 RS--IPNALTQAIRNFAKNLEIWLCESMLGVPEQLAQIKTSAVSAFCQTLRRYTSL 719 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rfx | NP_001247023.2 | RFX_DNA_binding | 393..466 | CDD:280427 | 33/72 (46%) |
RFX1 | NP_013277.1 | RFX_DNA_binding | 282..358 | CDD:396712 | 33/75 (44%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 76 | 1.000 | Domainoid score | I2119 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000699 | |
OrthoInspector | 1 | 1.000 | - | - | otm46895 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_102578 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR12619 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1282 |
SonicParanoid | 1 | 1.000 | - | - | X291 | |
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
8 | 8.030 |