Sequence 1: | NP_001247023.2 | Gene: | Rfx / 41266 | FlyBaseID: | FBgn0020379 | Length: | 919 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_011526467.1 | Gene: | RFX1 / 5989 | HGNCID: | 9982 | Length: | 1089 | Species: | Homo sapiens |
Alignment Length: | 1066 | Identity: | 369/1066 - (34%) |
---|---|---|---|
Similarity: | 479/1066 - (44%) | Gaps: | 286/1066 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 TTRLAPQRQFILSTRSAIVDATSP----------------------PEDSAEEQQQLTVEV-ESA 43
Fly 44 TNGVITNSTTSPPPHAEQFEFCTEDGVVVSATLEDVMTQVK-------LFPL-LQNCQLLQKKLV 100
Fly 101 DEDDDSTGVGATDADQLEVISVVLPMDAEDSTSDAHLHG-------------HVVNSSSDTMGTI 152
Fly 153 TTTEPNGTT---VTHSIPIHS-----MADLAAIKDG------------VDLAQQVANGQVTVVQT 197
Fly 198 TEDDD------------------------------------------------------------ 202
Fly 203 --------------------------GTPFITVTVSGQEQ-------NYQVQYV---DSELYHSN 231
Fly 232 SSQTQMTYPFCPVGDYQGNGQTAYYSTTGQYGTTSSAGGSSNGAHSTTLPYLVPVEEGILLNGSA 296
Fly 297 HSLSQSQSQSHGRDSPHSLTVSSRDWERDADRVNGTNRHWVQEVAYIQEAQSTPQTPTSTTTTHS 361
Fly 362 ASGGSLGTGGGGASPDSDQSA----------------LGSSN-------KIASATIKWLSRNYET 403
Fly 404 ADGVSLPRSTLYNHYMQHCSEHKLEPVNAASFGKLIRSVFSGLRTRRLGTRGNSKYHYYGIRIKP 468
Fly 469 GSLLNSQAMDDKQMLAAGYGPSSDGTGGPGSGPMVSVTSSTAGQLTGSNGLGGGHGQRHSNGTKK 533
Fly 534 HTFKPETYEACIQYIGDGTSALPSFPPIELNHSFNSE-LTLEDVDTFRGLYREHCESFLDAVLNL 597
Fly 598 EFNTVEFLLRDFWRASDNNNLDECEE----------EKYLSKTKLYLLCHCAEVQKFVREVDYQF 652
Fly 653 YQNTVDVIIPDVLRSIPNALTQAIRNFAKNLEIWLCESMLGVPEQLAQIKTSAVSAFCQTLRRYT 717
Fly 718 SLNHLAQAARAVLQNGAQISQMLSDLNRVDFHNVQEQAAWVSQCAPAVVQRLESDFKAALQQQSS 782
Fly 783 LEQWASWLQLVVESAMEEYNGKPTYARAARQFLLKWSFYSSMIIRDLTLRSASSFGSFHLIRLLF 847
Fly 848 DEYMFYLVEHKIAEAQDKTAIAVICE 873 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rfx | NP_001247023.2 | RFX_DNA_binding | 393..466 | CDD:280427 | 60/72 (83%) |
RFX1 | XP_011526467.1 | TFIIA | 75..>280 | CDD:281188 | 48/219 (22%) |
RFX1_trans_act | 224..481 | CDD:282451 | 42/261 (16%) | ||
RFX_DNA_binding | 545..621 | CDD:280427 | 61/75 (81%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165159859 | |
Domainoid | 1 | 1.000 | 386 | 1.000 | Domainoid score | I808 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 529 | 1.000 | Inparanoid score | I1224 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D278246at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000699 | |
OrthoInspector | 1 | 1.000 | - | - | otm41924 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_102578 | |
Panther | 1 | 1.100 | - | - | O | PTHR12619 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1282 |
SonicParanoid | 1 | 1.000 | - | - | X291 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
12 | 11.930 |