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Protein Alignment Rfx and Rfx5
DIOPT Version :9
Sequence 1: | NP_001247023.2 |
Gene: | Rfx / 41266 |
FlyBaseID: | FBgn0020379 |
Length: | 919 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001342634.1 |
Gene: | Rfx5 / 53970 |
MGIID: | 1858421 |
Length: | 658 |
Species: | Mus musculus |
Alignment Length: | 182 |
Identity: | 56/182 - (30%) |
Similarity: | 82/182 - (45%) |
Gaps: | 26/182 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 328 RVNGTNRHWVQE--VAYIQEAQSTPQTPTSTTTTHSASGGSLGTGGGGASPDSDQSALGSSNKIA 390
|:.||....||. ...:||.|...............||.|:| ...|:.|.| ||:..
Mouse 32 RLRGTISKAVQNKVEGILQEVQKFSDNDKLYLYLQLPSGPSVG------EKSSEPSLL--SNEEY 88
Fly 391 SATIKWLSRNYETADGVSLPRSTLYNHYMQHC-SEHKLEPVNAASFGKLIRSVFSGLRTRRLGTR 454
....:|:..:.|......||:.::|:.|.::| |.....|::.|:|||:||.:|..::.||||.|
Mouse 89 MYAYRWIRNHLEEHMDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGGR 153
Fly 455 GNSKYHYYGIRIKPGSLLNSQAMDDKQMLAAGYGPSSD--GTGGPGSGPMVS 504
|.|||.|.|||.| :|::...: |..| |:..|..||.||
Mouse 154 GQSKYCYSGIRRK--TLVSMPPL-----------PGLDLKGSESPEMGPEVS 192
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.000 |
|
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