Sequence 1: | NP_001247023.2 | Gene: | Rfx / 41266 | FlyBaseID: | FBgn0020379 | Length: | 919 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001013296.1 | Gene: | rfx2 / 503590 | ZFINID: | ZDB-GENE-050227-4 | Length: | 734 | Species: | Danio rerio |
Alignment Length: | 743 | Identity: | 316/743 - (42%) |
---|---|---|---|
Similarity: | 425/743 - (57%) | Gaps: | 138/743 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 214 QEQNY---QVQYVD-SELYHSNSSQTQMTYPFCPVGDYQGNGQ-TAYYSTTGQYGTTSSAGGS-- 271
Fly 272 ----SNGAHSTTLPYLVPVEEG---ILLNGSAHSLSQSQSQSHG--RDSPHSLTVSSRDWERDAD 327
Fly 328 RVNGTNRHWVQEVAYIQEAQSTPQTPTSTTTTHSASGGSLGTGGGGASPDSDQSALGSSNKIASA 392
Fly 393 TIKWLSRNYETADGVSLPRSTLYNHYMQHCSEHKLEPVNAASFGKLIRSVFSGLRTRRLGTRGNS 457
Fly 458 KYHYYGIRIKPGSLLNSQAMDDKQMLAAGYGP-----------SSDGTGGPGSGPMVSVTSSTAG 511
Fly 512 QLTGSNGLGGGHGQRHSNGTKKHTFKPETYEAC---IQYIGDGTSALPSFPPIELNH-SFNSELT 572
Fly 573 LEDVDTFRGLYREHCESFLDAVLNLEFNTVEFLLRDFWR----ASDN-----NNLDECEEEKYLS 628
Fly 629 KTKLYLLCHCAEVQKFVREVDYQFYQNTVDVIIPDVLRSIPNALTQAIRNFAKNLEIWLCESMLG 693
Fly 694 VPEQLAQIKTSAVSAFCQTLRRYTSLNHLAQAARAVLQNGAQISQMLSDLNRVDFHNVQEQAAWV 758
Fly 759 SQCAPAVVQRLESDFKAALQQQSSLEQWASWLQLVVESAMEEYNGKPTYARAARQFLLKWSFYSS 823
Fly 824 MIIRDLTLRSASSFGSFHLIRLLFDEYMFYLVEHKIAEAQDKTAIAVICERMKKDMDFEFECQFA 888
Fly 889 YITSDTEHQTTPS-SASSGGDVGNEAKR 915 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rfx | NP_001247023.2 | RFX_DNA_binding | 393..466 | CDD:280427 | 59/72 (82%) |
rfx2 | NP_001013296.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..31 | ||
RFX1_trans_act | 11..158 | CDD:282451 | 28/98 (29%) | ||
RFX_DNA_binding | 205..277 | CDD:280427 | 59/71 (83%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 694..722 | 6/20 (30%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170596119 | |
Domainoid | 1 | 1.000 | 389 | 1.000 | Domainoid score | I755 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 528 | 1.000 | Inparanoid score | I1191 |
OMA | 1 | 1.010 | - | - | QHG49084 | |
OrthoDB | 1 | 1.010 | - | - | D278246at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000699 | |
OrthoInspector | 1 | 1.000 | - | - | otm25965 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_102578 | |
Panther | 1 | 1.100 | - | - | O | PTHR12619 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1282 |
SonicParanoid | 1 | 1.000 | - | - | X291 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
13 | 12.940 |