Sequence 1: | NP_001247023.2 | Gene: | Rfx / 41266 | FlyBaseID: | FBgn0020379 | Length: | 919 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038940474.1 | Gene: | Rfx8 / 501127 | RGDID: | 1560724 | Length: | 597 | Species: | Rattus norvegicus |
Alignment Length: | 600 | Identity: | 137/600 - (22%) |
---|---|---|---|
Similarity: | 231/600 - (38%) | Gaps: | 166/600 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 346 AQSTPQTPTSTTTTHSASGGSLGTGGGGASPDSDQSALGSSNKIASATIKWLSRNYETADGVSLP 410
Fly 411 RSTLYNHYMQHCSEHKLEPVNAASFGKLIRSVFSGLRTRRLGTRGNSKYHYYGIRIKPGS----- 470
Fly 471 ---LLNSQAMDDKQMLAAGYGP------------------SSDGTGGPGSGPMVSVTSSTAGQLT 514
Fly 515 GSNGLGGGHGQRHSNGTKKHTFKPETYEACIQYIGDGTSALPSFPPIELNHSFNSELTLEDVDTF 579
Fly 580 RGLYREHCESFLDAVLNLEFNTVEFLLRDFWRASDNNNLDECEEEKYLSKTKLYLLCHCAEVQKF 644
Fly 645 VREVDYQFYQNTVDVIIPDVLRSIPNALTQAIRNFAKNLEIWLCESMLGVPEQLAQIKTSAVSAF 709
Fly 710 CQTLRRYTSLNHLAQAARAVLQNGAQISQMLSDLNRV----------------DFHNVQEQAAWV 758
Fly 759 SQCAPAVVQRLESDFKAALQQQSSLEQWASWLQLVVESAMEEYNGKPTYARAARQFLLKWSFYSS 823
Fly 824 MIIRDLTLRSASSFGSFHLIRLLFDEYMFYLVEHKIAEAQDKTAIAVICERMKKDMDFEFECQFA 888
Fly 889 YITSDTEHQTTPSSA 903 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rfx | NP_001247023.2 | RFX_DNA_binding | 393..466 | CDD:280427 | 35/72 (49%) |
Rfx8 | XP_038940474.1 | RFX_DNA_binding | 19..90 | CDD:396712 | 33/70 (47%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D346630at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |