Sequence 1: | NP_001247023.2 | Gene: | Rfx / 41266 | FlyBaseID: | FBgn0020379 | Length: | 919 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038936002.1 | Gene: | Rfx4 / 500818 | RGDID: | 1562092 | Length: | 757 | Species: | Rattus norvegicus |
Alignment Length: | 601 | Identity: | 193/601 - (32%) |
---|---|---|---|
Similarity: | 276/601 - (45%) | Gaps: | 126/601 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 306 SHGRDSPHSLTVSSRDWERDADRVNGTNRHWVQEVAYIQEAQSTPQTPTSTTT-----------T 359
Fly 360 HSASGGSLGTGGGGASPDSDQSALGSSNKIAS-----ATIKWLSRNYETADGVSLPRSTLYNHYM 419
Fly 420 QHCSEHKLEPVNAASFGKLIRSVFSGLRTRRLGTRGNSKYHYYGIRIKPGSLLNSQAMDDKQMLA 484
Fly 485 AGYGPSSDGTGGPGSGPMVSVTSSTAGQLTGSNGLGGGHGQRHSNGTKKHTFKPETYEACIQYIG 549
Fly 550 DGTSALPSFPPI-ELNHSFNSELTLEDVDTFRGLYREHCESFLDAVLNLEFNTVEFLLRDFWRAS 613
Fly 614 DNNNLDECEEEKYLSKTKLYLLCHCAEVQKFVREVDYQFYQNTVDVIIPDVLRSIPNALTQAIRN 678
Fly 679 FAKNLEIWLCESMLGVPEQLAQIKTSAVSAFCQTLRRYTSLNHLAQAARAVLQNGAQISQMLSDL 743
Fly 744 NRVDFHNVQEQAAWVSQCA----PAVVQRLESDFKAALQQQSSLEQWASWLQLVVESAMEEYNGK 804
Fly 805 --PTYARAARQFLLKWSFYSSMIIRDLTLRSASSFGSFHLIRLLFDEYMFYLVEH---------- 857
Fly 858 --------KIAEAQDK 865 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rfx | NP_001247023.2 | RFX_DNA_binding | 393..466 | CDD:280427 | 46/72 (64%) |
Rfx4 | XP_038936002.1 | RFX_DNA_binding | 81..156 | CDD:396712 | 47/74 (64%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D278246at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000699 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X291 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.920 |