Protein Alignment Rfx and CG9727

DIOPT Version :9

• Sequence 1: NP_001247023.2
• Gene: Rfx / 41266
• FlyBaseID: FBgn0020379
• Length: 919
• Species: Drosophila melanogaster
• Sequence 2: NP_001262317.1
• Gene: CG9727 / 40794
• FlyBaseID: FBgn0037445
• Length: 1329
• Species: Drosophila melanogaster
• Alignment Length: 475
• Identity: 103/475 - (21%)
• Similarity: 168/475 - (35%)
• Gaps: 161/475 - (33%)

  Fly   120 ISVVLPMDAEDST--------------SDAHLHGHVVNSSSDTMGTITTTEPNG----------T 160
            |.|.||:...::.              |.....|..:::....: |||...|.|          |
  Fly    35 IPVALPLQKPNANPYGNCSLQPADIVYSATRFQGPAIHAKGSPL-TITPVGPVGGAPASAQISPT 98

  Fly   161 TVTHSIPIHSMADLAAIKDGVDLAQQVANGQVTVVQTTEDDDGTPFITVTVSGQEQNYQVQYVDS 225
            :.|| :|:........:......|...:.|..|.|.|.     .||.|.:
  Fly    99 SHTH-VPVPVATPSGFVPPPFSNATSASGGVSTSVLTP-----NPFATAS--------------- 142

  Fly   226 ELYHSNSSQTQMTYPFCPVGDYQGNGQTAYYSTTGQYG---TTSSAGGSSNGAHSTTLPYL---- 283
                :|::.......|.             :||..|.|   ...:.||::.|..|..:|..
  Fly   143 ----ANAAGLAFANAFS-------------FSTAQQLGLGKIMHAMGGATAGVPSAPVPVTTTPA 190

  Fly   284 ------------------VPVEEGILLNGSAHSLSQSQSQSHGRDSPHSLTVSSRDWERDADRVN 330
                              ||...|::.:..|.::..:.|.|:...|     |.|.:..|...:|.
  Fly   191 TAAPSTPTIAGPRHPNEGVPAASGVINSTIAENVMNALSNSNSAGS-----VPSEEKMRRVLQVI 250

  Fly   331 GTNRHWVQEVAYIQEAQSTPQTPTSTTTTHSASGGSLGTGGGGASP---------------DSD- 379
            .|:   :.:.|.:|.:|...:.                   .|..|               |:|
  Fly   251 ETS---LDDNAKLQISQILERV-------------------SGLKPIEKLFLYLRLPGECADTDP 293

  Fly   380 ----QSALGSSNKIASATIKWLSRNYETADGVSLPRSTLYNHYMQHCSEHKLEPVNAASFGKLIR 440
                |:.||:.::| :.||.|:..:.|....||:|:..:||.|:.:|....::|::.|.|||:::
  Fly   294 LRQPQNPLGTRSEI-NHTINWVRSHLEHDAQVSIPKQDVYNDYIAYCERLSIKPLSTADFGKVMK 357

  Fly   441 SVFSGLRTRRLGTRGNSKYHYYGIR----IKPGSLLNSQAMDDKQMLAAGYGPSSDGTGGPGSGP 501
            .||.|:|.|||||||||:|.|..:|    :.|..|  .|....:|::|          |...|.|
  Fly   358 QVFPGVRPRRLGTRGNSRYCYAAMRKTTKLTPPQL--PQLCKTEQIVA----------GDSNSDP 410

  Fly   502 MVSVTSSTAGQLTGSNGLGG 521
                     .|||.::.|||
  Fly   411 ---------SQLTSASSLGG 421

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rfx	NP_001247023.2	RFX_DNA_binding	393..466	CDD:280427	32/76 (42%)
CG9727	NP_001262317.1	RFX_DNA_binding	307..383	CDD:280427	32/76 (42%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45448424
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D346630at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	1	1.000	-	-		otm46895
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.940