Protein Alignment Rfx and trip13

DIOPT Version :10

• Sequence 1: NP_001247023.2
• Gene: Rfx / 41266
• FlyBaseID: FBgn0020379
• Length: 919
• Species: Drosophila melanogaster
• Sequence 2: XP_012819902.1
• Gene: trip13 / 394836
• XenbaseID: XB-GENE-974898
• Length: 440
• Species: Xenopus tropicalis
• Alignment Length: 321
• Identity: 62/321 - (19%)
• Similarity: 108/321 - (33%)
• Gaps: 115/321 - (35%)

  Fly   393 TIKWLSRNYETADGVSLPRSTLYNHYMQHCSEHKLEPVNAASFGKLIRSVFSGLRTRRLGTRGNS 457
            ||: ||..|.....|.:...:|::.:.             :..|||:..:|             .
 Frog   205 TIR-LSYRYRYGQLVEINSHSLFSKWF-------------SESGKLVTKMF-------------Q 242

  Fly   458 KYHYYGIRIKPGSLLNSQ------AMDDKQMLAAGYGPSSDGTGGPGSGPMVSVTSSTAGQLTGS 516
            |.|         .|:|.:      .:|:.:.|.|....|..|| .|...  :.|.::...|:
 Frog   243 KIH---------ELINDKEALVFVLIDEVESLTAARKASRAGT-EPSDA--IRVVNAVLTQI--- 292

  Fly   517 NGLGGGHGQRHSN----GTKKHTFKPE---TYEACI-QYIGDGT---------SALPSFPPIELN 564
                 .|.:|:.|    .|...|.|.:   |..|.| ||||..:         |.:......::.
 Frog   293 -----DHIKRYPNVVILSTSNLTEKIDVAFTDRADIKQYIGPPSPAAIFKIYLSCIEELMKCQII 352

  Fly   565 HSFNSELTLEDVDTFRGLYREHCESFLD---AVLNLEFNTVEFLLRDFWRASDNNNLDECEEEKY 626
            :.....|||.|::..         .||:   :.|:|:.|.:.       |.|:..:.....:..:
 Frog   353 YPKQQLLTLRDLEII---------GFLENNISKLSLQLNEIS-------RKSEGLSGRVLRKLPF 401

  Fly   627 LSKTKLYLLCHCAEVQKFV----REVDYQFYQNTVDVIIPDVLRSIPNALTQAIRNFAKNL 683
            |:.. |||......:::|:    ..||.||                     |..:||::|:
 Frog   402 LAHA-LYLQSPTVTIERFLWALSLAVDEQF---------------------QERKNFSENI 440

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rfx	NP_001247023.2	RFX_DNA_binding	392..468	CDD:460512	13/74 (18%)
trip13	XP_012819902.1	RecA-like_Pch2-like	129..327	CDD:410916	34/168 (20%)