Sequence 1: | NP_001247023.2 | Gene: | Rfx / 41266 | FlyBaseID: | FBgn0020379 | Length: | 919 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038940262.1 | Gene: | Rfx3 / 361746 | RGDID: | 1307779 | Length: | 780 | Species: | Rattus norvegicus |
Alignment Length: | 873 | Identity: | 356/873 - (40%) |
---|---|---|---|
Similarity: | 460/873 - (52%) | Gaps: | 212/873 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 113 DADQLEVISVVLPMDAEDSTSDAHLHGHVVNSSSDTMGTITTTEPNGTTVTHSIPIHSMADLAAI 177
Fly 178 KDGVDLAQQV-ANGQVTVVQTTEDDDGTPFITVTVSGQEQNY---QVQYVD-SELYHSNSSQTQM 237
Fly 238 TYPFCPVGDYQGNGQTAYYSTTG--------------------QYGTT-----SSAGGSSNGAHS 277
Fly 278 TTLPYLVPVEEGILLNGSAHSLSQSQSQSHGRDSPHSLTVSSRDWERDADRVNGTNRHWVQEVAY 342
Fly 343 IQEAQSTPQTPTSTTTTHSASGGSLGTGGGGASPDSDQSALGSSNKIASATIKWLSRNYETADGV 407
Fly 408 SLPRSTLYNHYMQHCSEHKLEPVNAASFGKLIRSVFSGLRTRRLGTRGNSKYHYYGIRIKPGSLL 472
Fly 473 NSQAMDDKQMLAAGYGPS---------------SDGTGGPGSGPMVSVTSSTAGQLTGSNGLGGG 522
Fly 523 HGQRHSNGTKKHTFKPETYEACIQYIGDGTSALPSFPPIELNHSFNSELTLEDVDTFRGLYREHC 587
Fly 588 ESFLDAVLNLEFNTVEFLLRDFWRAS-----------DNNNLDECEEEKYLSKTKLYLLCHCAEV 641
Fly 642 QKFVREVDYQFYQNTVDVIIPDVLRSIPNALTQAIRNFAKNLEIWLCESMLGVPEQLAQIKTSAV 706
Fly 707 SAFCQTLRRYTSLNHLAQAARAVLQNGAQISQMLSDLNRVDFHNVQEQAAWVSQCAPAVVQRLES 771
Fly 772 DFKAALQQQSSLEQWASWLQLVVESAMEEYNGKPTYARAARQFLLKWSFYSSMIIRDLTLRSASS 836
Fly 837 FGSFHLIRLLFDEYMFYLVEHKIAEAQDKTAIAVICE----------RMKKDMDFEFECQFAYIT 891
Fly 892 SDTEHQTTPSSASSGGDVGNEAKRLKQE 919 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rfx | NP_001247023.2 | RFX_DNA_binding | 393..466 | CDD:280427 | 60/72 (83%) |
Rfx3 | XP_038940262.1 | None |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166353924 | |
Domainoid | 1 | 1.000 | 384 | 1.000 | Domainoid score | I783 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 529 | 1.000 | Inparanoid score | I1181 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D278246at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000699 | |
OrthoInspector | 1 | 1.000 | - | - | otm46062 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_102578 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR12619 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X291 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
11 | 10.900 |