Sequence 1: | NP_001247023.2 | Gene: | Rfx / 41266 | FlyBaseID: | FBgn0020379 | Length: | 919 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_011246631.1 | Gene: | Rfx1 / 19724 | MGIID: | 105982 | Length: | 1073 | Species: | Mus musculus |
Alignment Length: | 1027 | Identity: | 365/1027 - (35%) |
---|---|---|---|
Similarity: | 497/1027 - (48%) | Gaps: | 228/1027 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 PQRQFILSTRSAIVDATSPPEDSAEEQQQLTVEVESATNGVITNSTTSPPPHAEQFEFCT--EDG 69
Fly 70 VVVSATLED-----------VMTQVKLFPLLQNCQLLQKKLVDEDDDSTGVGATDADQLEVISVV 123
Fly 124 LPMDA-------EDSTSDAHLHGHVV---------------------NSSSDTMGTITTTEPNGT 160
Fly 161 TVTHSIPIHSMADLAAIKDGVDLAQQVANGQVTVVQTTEDDDGTPFITVTVSGQEQNYQVQYVDS 225
Fly 226 ELYHSNSSQTQMTYPFCP--------------------VGDYQGNGQTAYYST------------ 258
Fly 259 -------------TGQYGTTSSAGGSSNGAHSTTLPYLVPVEEGILLNGSAHSLSQSQSQSHGRD 310
Fly 311 SPHSLT-----VSSRDWERDADRVNGTNRHWVQEVAYIQEA-------------QSTPQT----- 352
Fly 353 ---------------PTSTTTTHSASGGSLGTGG-------GGASPDSDQSALGS---------- 385
Fly 386 --------SNKIASATIKWLSRNYETADGVSLPRSTLYNHYMQHCSEHKLEPVNAASFGKLIRSV 442
Fly 443 FSGLRTRRLGTRGNSKYHYYGIRIKPGSLLNSQAMDDKQMLAAGYGPSSDGTGGPGSGPMVSVTS 507
Fly 508 STAGQLTGSNGLGGGHGQRHSNGTKKHTFKPETYEACIQYIGDGTSALPSFPPIELNHSFNSE-L 571
Fly 572 TLEDVDTFRGLYREHCESFLDAVLNLEFNTVEFLLRDFWRASDNNNLDECEE----------EKY 626
Fly 627 LSKTKLYLLCHCAEVQKFVREVDYQFYQNTVDVIIPDVLRSIPNALTQAIRNFAKNLEIWLCESM 691
Fly 692 LGVPEQLAQIKTSAVSAFCQTLRRYTSLNHLAQAARAVLQNGAQISQMLSDLNRVDFHNVQEQAA 756
Fly 757 WVSQCAPAVVQRLESDFKAALQQQSSLEQWASWLQLVVESAMEEYNGKPTYARAARQFLLKWSFY 821
Fly 822 SSMIIRDLTLRSASSFGSFHLIRLLFDEYMFYLVEHKIAEAQDKTAIAVICE 873 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rfx | NP_001247023.2 | RFX_DNA_binding | 393..466 | CDD:280427 | 60/72 (83%) |
Rfx1 | XP_011246631.1 | RFX1_trans_act | 209..467 | CDD:398335 | 48/290 (17%) |
RFX_DNA_binding | 531..606 | CDD:396712 | 61/74 (82%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167850228 | |
Domainoid | 1 | 1.000 | 384 | 1.000 | Domainoid score | I814 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 527 | 1.000 | Inparanoid score | I1220 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D346630at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000699 | |
OrthoInspector | 1 | 1.000 | - | - | otm43972 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_102578 | |
Panther | 1 | 1.100 | - | - | O | PTHR12619 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1282 |
SonicParanoid | 1 | 1.000 | - | - | X291 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
12 | 11.930 |