Protein Alignment Rfx and rfx6

DIOPT Version :9

• Sequence 1: NP_001247023.2
• Gene: Rfx / 41266
• FlyBaseID: FBgn0020379
• Length: 919
• Species: Drosophila melanogaster
• Sequence 2: XP_002938344.3
• Gene: rfx6 / 100487566
• XenbaseID: XB-GENE-1013164
• Length: 931
• Species: Xenopus tropicalis
• Alignment Length: 526
• Identity: 171/526 - (32%)
• Similarity: 254/526 - (48%)
• Gaps: 85/526 - (16%)

  Fly   388 KIASATIKWLSRNYETADGVSLPRSTLYNHYMQHCSEHKLEPVNAASFGKLIRSVFSGLRTRRLG 452
            |....|::||..||...:||.|||..||.||:..|.:.||||..||:|||.||..|..|.|||||
 Frog   130 KQTQLTLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLG 194

  Fly   453 TRGNSKYHYYGIRIKPGSLLNSQAMDDKQMLAAGYGPSSDGTGGPGSGPMVSVTSSTAGQLTGSN 517
            |||:||||||||.||..|              |.|.....|.|         :|..:..:|....
 Frog   195 TRGHSKYHYYGIGIKESS--------------AYYHSVYSGKG---------LTRFSGSKLKSEG 236

  Fly   518 GLGGGHGQRHSNGTKKHTFKPETYEACIQYIGDGTSALPSFPPIELNHSFNSELTLEDVDTFRGL 582
            |.           |:|::...:|          || .||.||..: :......::.|.|||...:
 Frog   237 GF-----------TRKYSLSSKT----------GT-LLPEFPSAQ-HLVLQGCISKEKVDTLIMM 278

  Fly   583 YREHCESFLDAVLNLEFNTVEFLLRDFWRASDNNNLDECEEEKYLSKTKLYLLCHCAEVQKFVRE 647
            |:.||:..||..:|..|..::..|..||:...::.|...|....:.     :.|.|
 Frog   279 YKTHCQCVLDNAINGNFEEIQHFLLHFWQGMPDHLLPLLENPIIID-----IFCVC--------- 329

  Fly   648 VDYQFYQNTVDVIIPDVLRSIPNALTQAIRNFAKNLEIWLCESMLGVPEQLAQIKTSAVSAFCQT 712
             |...|:...:|:||..::.:|.:|...||||||:.|.|:..|:..:||.|::.|......|..:
 Frog   330 -DSILYKVLTEVLIPATMQEMPESLLADIRNFAKHWEQWVVSSLENLPESLSEKKLPIARRFVSS 393

  Fly   713 LRRYTSLNHLAQAARAVLQNGAQISQMLSDLNRVDFHNVQEQAAWVSQCAPA-----VVQRLESD 772
            |:|.||..||||.||..|.:...::.|.||:.:||..::..||. ::.|:.|     |...|..:
 Frog   394 LKRQTSFLHLAQIARPALFDQNVVNSMTSDIEKVDLCSIGSQAL-LTSCSGADSDCDVYTELFQE 457

  Fly   773 FKAALQQQSSLEQWASWLQLVVESAM---EEYNGKPTYARAARQFLLKWSFYSSMIIRDLTLRSA 834
            .|..|::.:::|.:..||..|||..:   .:.||| :..:.|:.|||||||:.:.::.:|||.:|
 Frog   458 LKDLLKKNATVESFIEWLDNVVEQKVIKASKQNGK-SLKKRAQDFLLKWSFFGARVMHNLTLNNA 521

  Fly   835 SSFGSFHLIRLLFDEYMFYLVEHKIAEAQDKTAIAVICERMKKDMDFEFECQFAYITSDTEHQTT 899
            ||||||||||:|.|||:...||.:....:::....::.:.||              .:|....|.
 Frog   522 SSFGSFHLIRMLLDEYILLAVETQFNNDKEQELQNLLDKYMK--------------NADASKATF 572

  Fly   900 PSSASS 905
            .:|.||
 Frog   573 TASPSS 578

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rfx	NP_001247023.2	RFX_DNA_binding	393..466	CDD:280427	44/72 (61%)
rfx6	XP_002938344.3	RFX_DNA_binding	135..208	CDD:367002	44/72 (61%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D278246at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X291
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	2.010